Job Description P52697 Confidence 99.85% Date Thu Jan 5 12:06:01 GMT 2012 Rank 25 Aligned Residues 280 % Identity 13% Template c1qniE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:nitrous-oxide reductase; PDBTitle: crystal structure of nitrous oxide reductase from2 pseudomonas nautica, at 2.4a resolution Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																													.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	T	V	Y	I	A	S	P	E	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	T	Q	V	V	D	V	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	Y	Y	G	F	W	S	G	G	H	Q	G	E	V	R	V	L	G	V	P	S	M	R	E	L	M	R	I	P	V	F	N	V	D	S	A	T	G	W	G	I	T	N	E	S	K	E	I	L	G	G	D	Q	Q	Y	L	N	G	D	C	H	H	P	H	I	S	M	T	D	G	R	Y	D	G	K	Y	L	F	I	N
Template Known Secondary structure		S								B	T	T									T	T	T								S	S	S			T	T	T		T	T	T	S									S	S	S			S				B									T	T
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	A	G	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	T	R	L	E	D	G	L	P	V	G
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.
Template Sequence		D	K	A	N	T	R	V	A	R	I	R	L	D	.	.	I	M	K	T	D	K	I	T	H	I	P	N	V	Q	A	I	H	G	L	R	L	Q	K	V	P	K	T	N	Y	V	F	C	N	A	E	F	V	I	P	Q	P	N	D	G	T	D	F	S	L	D	N	S	Y	T	M	F	T	A	I	D	A	E	T	M	D
Template Known Secondary structure			T	T	T	T							T	T	.	.	T	T									T	T												S	S	B										S				S	S		S	S	S				G	G	G										T	T	T
Template Predicted Secondary structure															.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.																					.	.	.
Template Conservation																																																	.	.	.	.	.	.	.																					.	.	.
Template Sequence		V	A	W	Q	V	I	V	D	G	N	L	D	N	T	D	A	D	Y	T	G	K	Y	A	T	S	T	C	Y	N	S	E	R	A	V	D	L	A	G	T	M	R	N	D	R	D	W	V	.	.	.	.	.	.	.	V	V	F	N	V	E	R	I	A	A	A	V	K	A	G	N	F	K	T	I	.	.	.	G	D	S
Template Known Secondary structure									S	S									S	S	S	S							S		T	T			S	S					T		S	S					.	.	.	.	.	.	.														T	T			B			.	.	.	T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.																					.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.								.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.				.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260									.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.
Query Sequence		S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	.	.	.	.	.	.	.	.	D	G	S	V	L	S	K	E	G	F
Query Conservation																																																																.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	P	V	V	D	G	R	G	E	S	E	F	T	R	Y	I	P	V	.	.	.	.	.	.	.	.	.	.	P	K	N	P	H	G	L	N	T	S	P	D	G	K	Y	F	I	A	N	G	K	L	S	P	T	V	S	V	I	A	I	D	K	L	D	D	L	F	E	D	K	I	E	L	R	D	T	I	V	A	E
Template Known Secondary structure									S	S	S		S	S							.	.	.	.	.	.	.	.	.	.		S	S								T	T	S								T	T	S	S	B						G	G	G					T	T	T	S	S		G	G	G	G
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.											.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H	H	I	S	V	Y	E	I
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		P	E	L	G	L	G	P	L	H	T	T	F	D	G	R	G	N	.	A	Y	T	T	L	F	I	D	S	Q	V	C	K	W	N	I
Template Known Secondary structure			B			S									S	S	S		.						T	T	T	T
Template Predicted Secondary structure																			.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions