Job Description P52697 Confidence 96.95% Date Thu Jan 5 12:06:01 GMT 2012 Rank 159 Aligned Residues 272 % Identity 10% Template c1qfmA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein (prolyl oligopeptidase); PDBTitle: prolyl oligopeptidase from porcine muscle Resolution 1.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	R	P	E	F	R	.	.	.	.	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	A	A	E	S	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.										.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.
Template Sequence		L	R	G	Y	A	F	S	E	D	G	E	Y	F	A	Y	G	L	S	A	S	G	S	D	W	V	T	I	K	F	M	K	V	D	G	A	.	.	.	.	.	K	E	L	P	D	V	L	E	R	V	K	F	S	M	A	W	T	H	D	G	K	G	M	F	Y	N	A	Y	P	Q	Q	D	G	K	S	D	G	T	E	T
Template Known Secondary structure									T	T	S	S									T	T		S									T	T	T	T	.	.	.	.	.																		T	T	S	S											S	S			S	S	S
Template Predicted Secondary structure																																					.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure		.																									.	.																						.	.	.
Query SS confidence		.																									.	.																						.	.	.
Query Sequence		.	S	Y	N	A	G	N	V	S	V	T	R	L	E	D	G	L	P	V	G	V	V	D	V	V	.	.	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	.	.	.	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V
Query Conservation		.																									.	.																						.	.	.
Alig confidence		.																									.	.																						.	.	.
Template Conservation
Template Sequence		S	T	N	L	H	Q	K	L	Y	Y	H	V	L	G	T	D	Q	S	E	D	I	L	C	A	E	F	P	D	E	P	K	W	M	G	G	A	E	L	S	D	D	G	R	Y	V	L	L	S	I	R	E	G	D	P	V	N	R	L	W	Y	C	D	L	Q	Q	E	S	N	G	I	T	G	I	L	K	W	V	K	L	I
Template Known Secondary structure														T	T	S		G	G	G								T	T		T	T									T	T	S																					G	G	G	S	S	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		E	G	A	G	P	R	H	M	V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	.	S	V	D	V	W	E	L	K	D	P	H	G	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A	A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L
Query Conservation																											.
Alig confidence																											.														.	.	.	.	.
Template Conservation																																									.	.	.	.	.
Template Sequence		D	N	F	E	G	E	Y	D	Y	V	T	N	E	G	T	V	F	T	F	K	T	N	R	H	S	P	N	Y	R	L	I	N	I	D	F	T	D	P	E	.	.	.	.	.	E	S	K	W	K	V	L	V	P	E	H	E	K	D	V	L	E	W	V	A	C	V	R	S	N	F	L	V	L	C	Y	L	H	D	V	K
Template Known Secondary structure			S	S	S	S									T	T								T	T		T	T								T	T	B			.	.	.	.	.	G	G	G									S	S										T	T	T									T	T
Template Predicted Secondary structure																																									.	.	.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.						.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H	H	I	S	V	Y	E	I	V	G	E	Q	G	L	L	H	E	K	G	R	Y	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	L	Q	L	H	D	L	A	T	G	A	L	L	K	I	F	P	L	E	V	G	S	V	V	G	Y	S	G	Q	K	K	D	T	E	I	F	Y	Q	F	T	S	F	L	S	P	G	I	I	Y	H	C	D	L	T	K	E	E	L	E	P	R	V	F	R	E	V
Template Known Secondary structure									T	T	T											S	S									T	T		S									S	S										T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions