Job Description P52697 Confidence 99.42% Date Thu Jan 5 12:06:01 GMT 2012 Rank 106 Aligned Residues 308 % Identity 13% Template c1n6dE_ PDB info PDB header:hydrolase Chain: E: PDB Molecule:tricorn protease; PDBTitle: tricorn protease in complex with tetrapeptide chloromethyl2 ketone derivative Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																							.	.	.																					.	.	.	.
Query SS confidence																																																							.	.	.																					.	.	.	.
Query Sequence		K	Q	T	V	Y	I	A	S	P	E	S	Q	Q	I	H	V	W	N	L	N	H	E	G	A	L	T	L	T	Q	V	V	D	V	P	G	Q	V	Q	P	M	V	V	S	P	D	K	R	Y	L	Y	V	G	V	.	.	.	R	P	E	F	R	V	L	A	Y	R	I	A	P	D	D	G	A	L	T	F	.	.	.	.
Query Conservation																																																							.	.	.																					.	.	.	.
Alig confidence												.	.	.										.	.	.																													.	.	.																					.	.	.	.
Template Conservation												.	.	.										.	.	.
Template Sequence		D	R	I	I	F	V	C	C	D	D	.	.	.	L	W	E	H	D	L	K	S	G	.	.	.	S	T	R	K	I	V	S	N	L	G	V	I	N	N	A	R	F	F	P	D	G	R	K	I	A	I	R	V	M	R	G	S	S	L	N	T	A	D	L	Y	F	Y	N	G	E	N	G	E	I	K	R	I	T	Y	F
Template Known Secondary structure		T							T	T		.	.	.						T	T	T	T	.	.	.								S	S	S									T	T	S	S									S	T	T											T	T	T	T
Template Predicted Secondary structure												.	.	.										.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
			75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure		.																													.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																													.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	A	A	E	S	A	L	P	G	S	P	T	H	I	S	T	D	H	Q	G	Q	F	V	F	V	G	S	Y	N	.	.	.	A	G	N	V	S	V	T	R	L	E	D	G	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.																													.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																													.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	K	S	T	G	R	R	M	F	T	D	V	A	G	F	D	P	D	G	N	L	I	I	S	T	D	A	M	Q	P	F	S	S	M	T	C	L	Y	R	V	E	N	D	G	I	N	F	V	P	L	N	L	G	P	A	T	H	I	L	F	A	D	G	R	R	V	I	G	R	N	T	F	E	L	P	H	W	K	G
Template Known Secondary structure							S	S				S							T	T	S								T	T	S	S	S	T	T									T	T	T	T											S						T	T							S		S			T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
																	117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	V	V	D	V	V	E	G	L	D	G	C	H	S	A	N	I	S	P	D	N	R	T	L	W	V	P	A	L	K	Q	D	R	I	C	L	F	T	V	S	D	D	G	H	L	V	A	Q	D	P	A	E	V	T	T	V	E	G	A	G	P	R	H	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	R	G	G	T	R	G	K	I	W	I	E	V	N	S	G	A	F	K	K	I	V	D	M	S	T	H	V	S	S	P	V	I	V	G	H	R	I	Y	F	I	T	D	I	D	G	F	G	Q	I	Y	S	T	D	L	D	G	K	D	L	R	K	H	T	S	F	T	D	Y	Y	P	R	H	L	N	T	D	G	R	R
Template Known Secondary structure				S	T	T										T	T									S	S									T	T								T	T	S	S								T	T	S		S									S	S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210																															.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	H	P	N	E	Q	Y	A	Y	C	V	N	E	L	N	S	S	V	D	V	W	E	L	K	D	P	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	E	C	V	Q	T	L	D	M	M	P	E	N	F	S	D	T	R	W	A
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	F	S	K	G	G	S	I	Y	I	F	N	P	D	T	E	K	I	E	K	I	E	I	G	D	L	E	S	P	E	D	R	I	I	S	I	P	S	K	F	A	E	D	F	S	P	L	D	G	D	L	I	A	F	V	S	R	G	Q	A	F	I	Q	D	V	S	G	T	Y	V	L	K	V	P	E	P	L	R	I
Template Known Secondary structure							T	T							T	T	T																S																	G	G	G							T	T							T	T	S	S	S								S
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	I	H	I	T	P	D	G	R	H	L	Y	A	C	D	R	T	A	S	L	I	T	V	F	S	V	S	E	D	G	S	V	L	S	K	E	G	F	Q	P	T	E	T	Q	P	R	G	F	N	V	D	H	S	G	K	Y	L	I	A	A	G	Q	K	S	H	H	I	S	V	Y	E	I	V	G	E	Q	G	L	L
Query Conservation
Alig confidence																																										.	.	.																						.							.	.
Template Conservation																																										.	.	.																						.							.	.
Template Sequence		R	Y	V	R	R	G	G	D	T	K	V	A	F	I	H	G	T	R	E	G	D	F	L	G	I	Y	D	Y	R	T	G	K	A	E	K	F	E	E	N	L	.	.	.	G	N	V	F	A	M	G	V	D	R	N	G	K	F	A	V	V	A	N	D	R	.	F	E	I	M	T	V	.	.	D	L	E	T	G	K	P
Template Known Secondary structure								S	S	S									S	S									T	T	T											.	.	.		S								T	T	S	S							T	T	.	S						.	.		T	T	T
Template Predicted Secondary structure																																										.	.	.																						.							.	.
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.				.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.		.	.	.	.	430	.			.	.	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	K	G	R	Y	A	V	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	I	E	R	S	R	E	A	M
Template Known Secondary structure								S	S	S
Template Predicted Secondary structure
Template SS confidence
		439	440	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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