Return to main results Retrieve Phyre Job Id

Job DescriptionP24200
Confidence10.92%DateThu Jan 5 11:41:10 GMT 2012
Rank67Aligned Residues48
% Identity17%Templated1twfa_
SCOP infobeta and beta-prime subunits of DNA dependent RNA-polymerase beta and beta-prime subunits of DNA dependent RNA-polymerase RNA-polymerase beta-prime
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   204.....210... ......220.........230.........240.........250...
Predicted Secondary structure 





.












Query SS confidence 









.







































Query Sequence  KGICENCGKN. APFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHR
Query Conservation 







  .


  


 











 

 














Alig confidence 









.






















..














Template Conservation     
 

      
 





 
  

       ..    

  

  
  
Template Sequence  NLKCQTCQEGMNECPGHFGHIDLAKPVFHVGFIA. . KIKKVCECVCMHCGK
Template Known Secondary structure 


SSS



TTS







GGG..B
TTT

Template Predicted Secondary structure 


























..





Template SS confidence 


















































   64.....70.........80.........90....... ..100.........110..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions