Return to main results Retrieve Phyre Job Id

Job DescriptionP24200
Confidence44.72%DateThu Jan 5 11:41:10 GMT 2012
Rank13Aligned Residues91
% Identity20%Templatec3goxB_
PDB info PDB header:hydrolase/dnaChain: B: PDB Molecule:restriction endonuclease hpy99i; PDBTitle: crystal structure of the beta-beta-alpha-me type ii restriction2 endonuclease hpy99i in the absence of edta
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   151........160.........170.........180.........190.........200...... ...210.........220........
Predicted Secondary structure 























..










Query SS confidence 























































. .





















Query Sequence  PTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGI. . CENCGKNAPFYLNDGNPYLEVH
Query Conservation     

  
  






  
  


  






 











 







..




  


  


 





Alig confidence 





























.......................


..









.










Template Conservation    

 
 
     


     
 
 
   
.......................
    
 

     
.     

 


Template Sequence  PSCRECRKNIDGVKLSSTEKKKMDEIAPPK. . . . . . . . . . . . . . . . . . . . . . . GSVFTCPICEKRSIV. GVTANLVHDHN
Template Known Secondary structure  SS

S


TT


T.......................TS
TTT

B.TTTB

Template Predicted Secondary structure 














.......................











.





Template SS confidence 















































































   95....100.........110.........120.... .....130......... 140.........150
 
   229230.........240.........250.........260.........270....
Predicted Secondary structure 









Query SS confidence 













































Query Sequence  HVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINR
Query Conservation 





 

 

















 


 


 
 

 

 
Alig confidence 







.........




























Template Conservation 
 

 


.........


  

 


  



 





 

 
Template Sequence  HDTGWGRE. . . . . . . . . WICDSCNTGLGRFKDNPKFLEKVIEYLKK
Template Known Secondary structure  TTT

.........TTT
Template Predicted Secondary structure 




.........











Template SS confidence 













































   151....... .160.........170.........180.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions