Return to main results Retrieve Phyre Job Id

Job DescriptionP24200
Confidence76.14%DateThu Jan 5 11:41:10 GMT 2012
Rank6Aligned Residues38
% Identity32%Templatec2orvB_
PDB info PDB header:transferaseChain: B: PDB Molecule:thymidine kinase; PDBTitle: human thymidine kinase 1 in complex with tp4a
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   204.....210...... ...220.........230.........240.........250..
Predicted Secondary structure 







..










Query SS confidence 












. .



































Query Sequence  KGICENCGKNAPF. . YLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCH
Query Conservation 







  


..  


 











 

 













Alig confidence 












..










........



...









Template Conservation   
 
  

  
  
 
       
 
........

 
... 
   

 

Template Sequence  TAVCMECFREAAYTKRLGTEKEVEVI. . . . . . . . GGAD. . . KYHSVCRLCY
Template Known Secondary structure 

TTTSS

SS

SS


........
STT...T
Template Predicted Secondary structure 










........



...


Template SS confidence 


















































   150.........160.........170..... .... 180.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions