Job Description P24200 Confidence 38.43% Date Thu Jan 5 11:41:10 GMT 2012 Rank 16 Aligned Residues 45 % Identity 31% Template c2iqjB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:stromal membrane-associated protein 1-like; PDBTitle: crystal structure of the gap domain of smap1l (loc64744)2 stromal membrane-associated protein 1-like Resolution 1.90 Å

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		190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.
Predicted Secondary structure															.																																																		.	.	.
Query SS confidence															.																																																		.	.	.
Query Sequence		V	R	D	P	M	V	K	A	W	I	L	Q	Q	.	S	K	G	I	C	E	N	C	G	K	N	A	P	F	Y	L	N	D	G	N	P	Y	L	E	V	H	H	V	I	P	L	S	S	G	G	A	D	T	T	D	N	C	V	A	L	C	P	N	C	.	.	.	H	R	E	L
Query Conservation															.																																																		.	.	.
Alig confidence															.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	R	Y	Q	A	V	L	A	N	L	L	L	E	E	D	N	K	F	C	A	D	C	Q	S	K	G	P	R	W	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	N	I	G	V	F	I	C	I	R	C	A	G	I	H	R	N	L
Template Known Secondary structure				S								T	T	S	G	G	G	G	B		T	T	T			B	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T													T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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