Job Description P24200 Confidence 14.04% Date Thu Jan 5 11:41:10 GMT 2012 Rank 53 Aligned Residues 47 % Identity 17% Template c1i6hA_ PDB info PDB header:transcription/dna-rna hybrid Chain: A: PDB Molecule:dna-directed rna polymerase ii largest subunit; PDBTitle: rna polymerase ii elongation complex Resolution 3.30 Å

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		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		K	G	I	C	E	N	C	G	K	N	A	P	F	Y	L	N	D	G	N	P	Y	L	E	V	H	H	V	I	P	L	S	S	G	G	A	.	.	D	T	T	D	N	C	V	A	L	C	P	N	C	H	R
Query Conservation																																					.	.
Alig confidence																			.							.	.										.	.
Template Conservation																			.							.	.
Template Sequence		N	L	K	C	Q	T	C	Q	E	G	M	N	E	C	P	G	H	.	F	G	H	I	D	L	.	.	A	K	P	V	F	H	V	G	F	I	A	K	I	K	K	V	C	E	C	V	C	M	H	C	G	K
Template Known Secondary structure					S	T	T					S	S	S					.							.	.							G	G	G									T	T			T	T	T	T
Template Predicted Secondary structure																			.							.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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