Job Description P0AAP1 Confidence 99.93% Date Thu Jan 5 11:13:24 GMT 2012 Rank 13 Aligned Residues 173 % Identity 25% Template c3pjwA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cyclic dimeric gmp binding protein; PDBTitle: structure of pseudomonas fluorescence lapd ggdef-eal dual domain, i23 Resolution 3.10 Å

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		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	T	K	L	A	E	H	K	R	R	L	Q	V	M	S	T	R	D	G	M	T	G	V	Y	N	R	R	H	W	E	T	M	L	R	N	E	F	D	N	C	R	R	H	N	R	D	A	T	L	L	I	I	D	I	D	H	F	K	S	I	N	D	T	W	G	H	D	V	G	D	E	A	I	V	A	L	T	R	Q
Query Conservation
Alig confidence																																													.
Template Conservation																																													.
Template Sequence		L	F	Q	E	Q	A	E	R	S	E	K	L	R	T	E	S	Y	Q	D	N	L	T	G	L	A	N	R	R	Y	F	E	M	Q	L	N	A	R	V	S	N	P	E	Q	.	A	S	S	G	Y	L	L	L	L	R	V	K	D	L	A	G	L	N	Q	R	L	G	G	Q	R	T	D	E	L	L	K	A	V	G	E	Q
Template Known Secondary structure							T	T											B		T	T	T	S	S														T	T		T	T	T	.												S
Template Predicted Secondary structure																																													.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		275	.	.	.	.					280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure							.	.	.	.
Query SS confidence							.	.	.	.
Query Sequence		L	Q	I	T	L	.	.	.	.	R	G	S	D	V	I	G	R	F	G	G	D	E	F	A	V	I	M	S	G	T	P	A	E	S	A	I	T	A	M	L	R	V	H	E	G	L	N	T	L	R	L	P	N	T	P	Q	V	T	L	R	I	S	V	G	V	A	P	L	N	P	Q	M	S	H	Y	R	E	W	L	K
Query Conservation							.	.	.	.
Alig confidence							.	.	.	.																																																															.
Template Conservation																																																																									.
Template Sequence		L	S	R	E	C	A	K	Y	P	E	T	Q	N	L	V	T	R	I	R	G	G	E	F	A	V	L	A	P	G	M	T	R	E	E	A	L	Q	L	A	Q	S	L	D	S	A	L	S	S	L	Y	A	T	G	A	T	D	V	A	A	V	A	S	I	G	L	A	P	F	A	H	G	.	D	S	P	Q	A	V	L	S
Template Known Secondary structure							S	S		S	T	T	T	T							T	T								T																		T						T	S		S		T	T											T	T	.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	D	L	A	L	Y	K	A	K	K	A	G	R	N	R	T	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	D	Q	A	L	A	Q	A	E	G	Q	G	E	Q	N	W	A	C
Template Known Secondary structure												S		S	S		S
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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