Job Description P0AAP1 Confidence 99.95% Date Thu Jan 5 11:13:24 GMT 2012 Rank 12 Aligned Residues 156 % Identity 22% Template c3mtkA_ PDB info PDB header:transferase Chain: A: PDB Molecule:diguanylate cyclase/phosphodiesterase; PDBTitle: x-ray structure of diguanylate cyclase/phosphodiesterase from2 caldicellulosiruptor saccharolyticus, northeast structural genomics3 consortium target clr27c Resolution 2.24 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	Q	V	M	S	T	R	D	G	M	T	G	V	Y	N	R	R	H	W	E	T	M	L	R	N	E	F	D	N	C	R	R	H	N	R	D	A	T	L	L	I	I	D	I	D	H	F	K	S	I	N	D	T	W	G	H	D	V	G	D	E	A	I	V	A	L	T	R	Q	L	Q	I	T	L	R	G	S	D	V
Query Conservation
Alig confidence																																.	.
Template Conservation																																.	.
Template Sequence		K	L	E	F	L	A	F	Y	D	E	L	T	G	L	P	N	K	N	S	L	I	R	W	L	N	L	K	V	S	Q	.	.	X	D	C	I	D	T	Y	L	I	F	L	E	V	R	D	L	E	K	L	N	V	T	Y	G	Y	D	L	V	D	E	L	I	I	H	I	S	K	R	I	K	D	I	A	G	E	G	N	K
Template Known Secondary structure									B		T	T	T		S	B															S	.	.	S			T	T									T	T																														S	S	S
Template Predicted Secondary structure																																.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	R	F	G	G	D	E	F	A	V	I	M	S	G	T	P	A	E	S	A	I	T	A	M	L	R	V	H	E	G	L	N	T	L	R	L	P	N	T	P	Q	V	T	L	R	I	S	V	G	V	A	P	L	N	P	Q	M	S	H	Y	R	E	W	L	K	S	A	D	L	A	L	Y	K	A	K	K	A	G	R
Query Conservation
Alig confidence																			.	.	.																																				.	.	.	.
Template Conservation																			.	.	.																																				.	.	.	.
Template Sequence		A	F	K	I	G	F	D	R	F	A	I	I	C	K	S	E	N	.	.	.	I	S	D	F	I	E	R	X	L	S	Q	L	L	L	P	Y	N	V	N	G	N	L	I	R	V	N	F	N	I	G	A	A	Q	I	E	.	.	.	.	A	A	A	N	L	X	R	R	C	D	L	A	L	I	K	A	K	E	E	G	L
Template Known Secondary structure							T	T									S	S	.	.	.													T	S					T	T																.	.	.	.																					T
Template Predicted Secondary structure																			.	.	.																																				.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.					.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		365	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	T	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	Y	V	I
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions