Job Description P0AAP1 Confidence 14.08% Date Thu Jan 5 11:13:24 GMT 2012 Rank 74 Aligned Residues 68 % Identity 26% Template c1t3nB_ PDB info PDB header:replication/dna Chain: B: PDB Molecule:polymerase (dna directed) iota; PDBTitle: structure of the catalytic core of dna polymerase iota in2 complex with dna and dttp Resolution 2.30 Å

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		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	G	H	D	V	G	D	E	A	I	V	A	L	T	R	Q	L	Q	I	T	L	R	G	S	D	V	I	G	R	F	G	G	D	E	F	A	V	I	M	S	G	T	P	A	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.
Template Sequence		E	D	L	T	R	Y	R	E	M	S	Y	K	V	T	E	L	L	E	E	F	S	P	V	.	.	.	V	E	R	L	G	F	D	E	N	F	V	D	L	T	E	M	V	E	K	R	L	Q	Q	L	Q	S	D	E	L	S	A	V	T	V	S	G	H	V	Y	N	N	Q	S	I	N	L	L	D	V	L	H	I	R	L
Template Known Secondary structure																							S		.	.	.					T	T	T																T	S		S	S	G	G	G	G					S			T	T	S					T	T
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.				540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
				305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	I	T	A	M	L	R	V	H	E	G	L	N	T	L	R	L	P	N	T	P	Q	V	T	L	R	I	S	V	G	V	A
Query Conservation		.	.
Alig confidence		.	.																		.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.
Template Sequence		L	V	G	S	Q	I	A	A	E	M	R	E	A	M	Y	N	Q	L	G	.	.	.	.	.	.	.	L	T	G	C	A	G	V	A
Template Known Secondary structure																					.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.
Template SS confidence
		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.								.	.	.	.	.	.	.	620

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions