|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
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. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
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. | . | 50 | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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| . | . |  |  |  |  |  |  |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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|  |  |  |
Query SS confidence |   |
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| . |
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| . |
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Query Sequence |   |
M | T | K | I | I | A | V | T | A | C | P | S | G | V | A | H | T | Y | M | A | A | E | A | L | E | S | A | A | K | A | K | G | W | . |
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E | V | K | V | E | T | Q | G | S | I | G | L | E | N | . |
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E | L | T | A | E | D |
Query Conservation |   |
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|   |
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|   | . | . |   |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
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|   |   |
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Alig confidence |   |
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| . | . |
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| . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
|   |   |
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| . | . |
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|   |
|   |   |   |   |   |   |
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|   |   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
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|   |   |   |   |
|   |
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|   |
|   |   |   |   |
Template Sequence |   |
M | K | K | I | L | F | I | . |
. |
C | L | G | N | I | C | R | S | P | M | A | E | F | I | M | K | D | L | V | K | K | A | N | L | E | K | E | F | F | I | N | S | A | G | T | S | G | E | H | D | G | E | G | M | H | Y | G | T | K | N | K | L | A | Q | L | N | I | E | H | K | N | F | T | S | K | K | L | T | Q | K | L |
Template Known Secondary structure |   |
|
|  |  |  |  |  | . | . |
| S | S |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T |
|  |  |  |  |  | B | S | S |
| S | S | T | T |
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|  |  |  |  |  |  |  |  |  | T | S |
| S |
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| B |
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|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  | . | . |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
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|  |  |  |
Template SS confidence |   |
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  |   |
1 | . | . | . | . | . | . | |
|
. | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
54 | . | . | . | . | . | 60 | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |
Query SS confidence |   |
|
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|
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|
Query Sequence |   |
V | A | S | A | D | M | V | I |
Query Conservation |   |
|   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|
|
Template Sequence |   |
C | D | E | S | D | F | L | I |
Template Known Secondary structure |   |
 | T | T |
| S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |
Template SS confidence |   |
|
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|
  |   |
79 | 80 | . | . | . | . | . | . |
  |