Return to main results Retrieve Phyre Job Id

Job DescriptionP17994
Confidence6.86%DateThu Jan 5 11:36:28 GMT 2012
Rank24Aligned Residues31
% Identity29%Templated1twfc1
SCOP infoDCoH-like RBP11-like subunits of RNA polymerase RNA polymerase alpha subunit dimerisation domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130.........140...
Predicted Secondary structure 













Query SS confidence 












































Query Sequence  LGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSH
Query Conservation 
 
 









 


 
 

  





 




   
 
 
Alig confidence 









...........




...















Template Conservation   








...........




...  

 




 




Template Sequence  LAMANSLRRV. . . . . . . . . . . MIAEI. . . AAAIEFEYDPWNKLKH
Template Known Secondary structure  ...........

...



SSTTS

Template Predicted Secondary structure  ..............




Template SS confidence 












































   27..30...... ...40. ........50.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions