Return to main results Retrieve Phyre Job Id

Job DescriptionP17994
Confidence7.08%DateThu Jan 5 11:36:28 GMT 2012
Rank16Aligned Residues27
% Identity19%Templated1a3qa1
SCOP infoImmunoglobulin-like beta-sandwich E set domains NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   283......290.........300.........
Predicted Secondary structure 


















Query SS confidence 


























Query Sequence  FEMGNDGWHSFVALNDESASVDASFDF
Query Conservation 

    

 
 



  
      

 
Alig confidence 


























Template Conservation   
     

    
   


 
 



Template Sequence  YEDDENGWQAFGDFSPTDVHKQYAIVF
Template Known Secondary structure 
SSS

B

GGGTTT
Template Predicted Secondary structure 









Template SS confidence 


























   263......270.........280.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions