Return to main results Retrieve Phyre Job Id

Job DescriptionP17994
Confidence3.84%DateThu Jan 5 11:36:28 GMT 2012
Rank67Aligned Residues46
% Identity11%Templatec3deeA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:putative regulatory protein; PDBTitle: crystal structure of a putative regulatory protein involved in2 transcription (ngo1945) from neisseria gonorrhoeae fa 1090 at 2.25 a3 resolution
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110.........120.........130.........140......
Predicted Secondary structure 
















Query SS confidence 



















































Query Sequence  HADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMV
Query Conservation   



 
 









 


 
 

  





 




   
 
 



Alig confidence 




















......
























Template Conservation        
 
   
     

 ......      
   

 
     
    
Template Sequence  NDSKYTPSPAAFIRQYRYDVT. . . . . . HDLQEAETALLIWRNAEDDVXYQTL
Template Known Secondary structure  TTS

TT

TT......TT


TTS

Template Predicted Secondary structure 










......












Template SS confidence 



















































   128.130.........140........ .150.........160.........170...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions