Return to main results Retrieve Phyre Job Id

Job DescriptionP27830
Confidence99.01%DateThu Jan 5 11:44:08 GMT 2012
Rank124Aligned Residues236
% Identity9%Templated2pd4a1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.. .......20.........30.........40.........50.........60.........70.. ..
Predicted Secondary structure 




..



















.....
Query SS confidence 










. .



























































. . . . .

Query Sequence  RKILITGGAGF. . IGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTE. . . . . HQ
Query Conservation 
 








..

  

  

  
  
    
                      
  

 
          .....  
Alig confidence 










..


































..






















.....

Template Conservation 
 







  


 
 
  

  

 
 
  
              ..         
                    
Template Sequence  KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQE. . LNSPYVYELDVSKEEHFKSLYNSVKKDLGS
Template Known Secondary structure 



STTSTTT
SSTTT..TT




TT
TS
Template Predicted Secondary structure 












..


















Template SS confidence 















































































   7..10.........20.........30.........40.........50.... .....60.........70.........80....
 
   75....80.........90.........100.........110.........120.........130.........140.........150....
Predicted Secondary structure 

















































Query SS confidence 















































































Query Sequence  PDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPY
Query Conservation         
                         
                        
                     
Alig confidence 










































































.....
Template Conservation      
  

                                               
  

            
 .....
Template Sequence  LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMG. . . . .
Template Known Secondary structure 





GGGGSS
GGG

TGGG
GGGTS

TT
.....
Template Predicted Secondary structure 














































.....
Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.........150.........
 
   155....160.........170.........180.........190.........200.........210.........220.........230....
Predicted Secondary structure 

















































Query SS confidence 















































































Query Sequence  APSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHAR
Query Conservation                                                                            
 
 
 
Alig confidence  ....























































.........










Template Conservation  ....


 
        
       
 

 
 

 
 
                    

......... 
   




 
Template Sequence  . . . . LAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL. . . . . . . . . RKNVSLEEVGN
Template Known Secondary structure  ....TTT





TTGGGSTTSTT.........SS


Template Predicted Secondary structure  ....























.........




Template SS confidence 















































































   160.........170.........180.........190.........200.........210..... ....220......
 
   235....240.... .....250.......
Predicted Secondary structure 




...








Query SS confidence 









. . .












Query Sequence  ALYCVATTGK. . . VGETYNIGGHNER
Query Conservation            ...      
      
Alig confidence 









...












Template Conservation   
 

 
  
  


  
 



   
Template Sequence  AGMYLLSSLSSGVSGEVHFVDAGYHV
Template Known Secondary structure  SGGGTT

S
STTGGG
Template Predicted Secondary structure 











Template SS confidence 

























   227..230.........240.........250..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions