Return to main results Retrieve Phyre Job Id

Job DescriptionP27830
Confidence98.84%DateThu Jan 5 11:44:08 GMT 2012
Rank181Aligned Residues227
% Identity19%Templated2d1ya1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70... ...
Predicted Secondary structure 
























.....


Query SS confidence 







































































. . . . .


Query Sequence  RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH. . . . . QPD
Query Conservation 
 










  

  

  
  
    
                      
  

 
           .....   
Alig confidence 










































.......





















.....


Template Conservation 
 






 


 


  

  

 
 
  
           .......                              
Template Sequence  KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAI. . . . . . . GGAFFQVDLEDERERVRFVEEAAYALGRVD
Template Known Secondary structure 
TTTSTT
SSTT.......T


TT
S


Template Predicted Secondary structure 









.......





























Template SS confidence 















































































   7..10.........20.........30.........40......... 50.........60.........70.........
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
Predicted Secondary structure 

















































Query SS confidence 















































































Query Sequence  CVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAP
Query Conservation       
                         
                        
                       
Alig confidence 



































































............
Template Conservation                                                          
           ............
Template Sequence  VLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENA. . . . . . . . . . . .
Template Known Secondary structure 






B
TTT

TTTT


GGGTS

TTB............
Template Predicted Secondary structure 


































































............
Template SS confidence 















































































   80.........90.........100.........110.........120.........130.........140.......
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
Predicted Secondary structure 















































Query SS confidence 















































































Query Sequence  SSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARAL
Query Conservation                                                                          
 
 
   
Alig confidence  ..





























.......















...





















Template Conservation  ..    

          
       
 

 
....... 

 
 
         ...       
  
   
 


   
Template Sequence  . . AYNASKGGLVNLTRSLALDLAPLRIRVNAV. . . . . . . APGAIATEAVLEAIAR. . . RDWEDLHALRRLGKPEEVAEAV
Template Known Secondary structure  ..GGGT.......
SB



...TTSTTSS
B
Template Predicted Secondary structure  ..




.......











...








Template SS confidence 















































































   148.150.........160.........170....... ..180.........190... ......200.........210.....
 
   237..240.... .....250.........
Predicted Secondary structure 




...









Query SS confidence 







. . .














Query Sequence  YCVATTGK. . . VGETYNIGGHNERKN
Query Conservation          ...      
      
 
Alig confidence 







...














Template Conservation    
 
  
  


  
 



     
Template Sequence  LFLASEKASFITGAILPVDGGMTASF
Template Known Secondary structure  SGGGTT

S
STTGGG

Template Predicted Secondary structure 












Template SS confidence 

























   224.....230.........240.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions