Return to main results Retrieve Phyre Job Id

Job DescriptionP27830
Confidence98.95%DateThu Jan 5 11:44:08 GMT 2012
Rank135Aligned Residues225
% Identity16%Templated2c07a1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70... ...
Predicted Secondary structure 
























.....


Query SS confidence 







































































. . . . .


Query Sequence  RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH. . . . . QPD
Query Conservation 
 










  

  

  
  
    
                      
  

 
           .....   
Alig confidence 

















































.




















.....


Template Conservation 
 






 


 
 
  
   

 

   
                  .      
                      
Template Sequence  KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE. SSGYAGDVSKKEEISEVINKILTEHKNVD
Template Known Secondary structure 
STTSTTTSSSSTTT

.

TT

S


Template Predicted Secondary structure 















.


















Template SS confidence 















































































   64.....70.........80.........90.........100.........110... ......120.........130.........140..
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
Predicted Secondary structure 

















































Query SS confidence 















































































Query Sequence  CVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAP
Query Conservation       
                         
                        
                       
Alig confidence 



































































............
Template Conservation                                                      
  

           ............
Template Sequence  ILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQA. . . . . . . . . . . .
Template Known Secondary structure 








TTT

TTT


T

TT
............
Template Predicted Secondary structure 




















































............
Template SS confidence 















































































   143......150.........160.........170.........180.........190.........200.........210
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
Predicted Secondary structure 















































Query SS confidence 















































































Query Sequence  SSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARAL
Query Conservation                                                                          
 
 
   
Alig confidence  ..





















































.............










Template Conservation  .. 
  

 
        
 
     



 
 

 
 
                
.............   




  
Template Sequence  . . NYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSISEQIKKNIISNIPAGR. . . . . . . . . . . . . MGTPEEVANLA
Template Known Secondary structure  ..GGGT
SB



TT
TTSS.............
B
Template Predicted Secondary structure  ..




























.............


Template SS confidence 















































































   211........220.........230.........240.........250.........260.... .....270.....
 
   237..240. ........250....
Predicted Secondary structure 

...








Query SS confidence 




. . .












Query Sequence  YCVAT. . . TGKVGETYNIGGH
Query Conservation       ...         
   
Alig confidence 




...












Template Conservation    
 
     


  
 



Template Sequence  CFLSSDKSGYINGRVFVIDGG
Template Known Secondary structure  SGGGTT

S
STT
Template Predicted Secondary structure 









Template SS confidence 




















   281........290.........300.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions