Phyre 2 alignment of P27830 with d1y1pa1

Job Description P27830
Confidence 99.97% Date Thu Jan 5 11:44:08 GMT 2012

Rank 52 Aligned Residues 316

% Identity 14% Template d1y1pa1

SCOP info NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases

Resolution 1.60

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence	R	K	I	L	I	T	G	G	A	G	F	I	G	S	A	L	V	R	Y	I	I	N	E	T	S	D	A	V	V	V	V	D	K	L	T	Y	A	G	N	L	M	S	L	A	P	V	A	.	Q	S	E	R	F	A	F	E	K	V	D	I	C	D	R	A	E	L	A	R	V	F	T	E	H	Q	P	D	C	V	M	H
Query Conservation																																																.
Alig confidence																																																.
Template Conservation
Template Sequence	S	L	V	L	V	T	G	A	N	G	F	V	A	S	H	V	V	E	Q	L	L	E	H	G	Y	K	V	R	G	T	A	R	S	A	S	K	L	A	N	L	Q	K	R	W	D	A	K	Y	P	G	R	F	E	T	A	V	V	E	D	M	L	K	Q	G	A	Y	D	E	V	I	K	G	A	A	G	V	A	H	I	A
Template Known Secondary structure							T	T	T	S													T	T								S	S															S	T	T	T							S		T	T	S	T	T	T	T	T	T	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
	13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

	81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.											.	.	.	150
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence	L	A	A	E	S	H	V	D	R	S	I	D	G	P	A	A	F	I	E	T	N	I	V	G	T	Y	T	L	L	E	A	A	R	A	Y	W	N	A	L	T	E	D	K	K	S	A	F	R	F	H	H	I	S	T	D	E	V	Y	G	D	L	H	S	T	D	D	.	.	.	.	.	.	.	.	.	.	F	F	T	E
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.
Template Sequence	S	V	V	S	F	S	N	K	Y	.	.	.	.	.	D	E	V	V	T	P	A	I	G	G	T	L	N	A	L	R	A	A	A	A	T	P	S	V	K	R	F	V	L	T	S	S	T	V	S	A	L	I	P	K	P	N	V	E	G	I	Y	L	D	E	K	S	W	N	L	E	S	I	D	K	A	K	T	L	P	E
Template Known Secondary structure				S			S			.	.	.	.	.																				T		T	T										G	G	G	T					T	T								T	T													S		T
Template Predicted Secondary structure										.	.	.	.	.
Template SS confidence
	93	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.

	151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																												.	.																												.	.
Query SS confidence																												.	.																												.	.
Query Sequence	T	T	P	Y	A	P	S	S	P	Y	S	A	S	K	A	S	S	D	H	L	V	R	A	W	L	R	T	.	.	Y	G	L	P	T	L	I	T	N	C	S	N	N	Y	G	P	Y	H	F	P	E	K	L	I	P	L	M	.	.	I	L	N	A	L	A	G	K	S	L	P	V	Y	G	N	G	Q	Q	I	R	D	W
Query Conservation																												.	.																												.	.
Alig confidence																												.	.																												.	.
Template Conservation
Template Sequence	S	D	P	Q	K	S	L	W	V	Y	A	A	S	K	T	E	A	E	L	A	A	W	K	F	M	D	E	N	K	P	H	F	T	L	N	A	V	L	P	N	Y	T	I	G	T	I	F	D	P	E	T	Q	S	G	S	T	S	G	W	M	M	S	L	F	N	G	E	V	S	P	A	L	A	L	M	P	P	Q	Y	Y
Template Known Secondary structure	T	S	T	T																											S	S								S							S		T	T	T														T	T								T			S
Template Predicted Secondary structure
Template SS confidence
	168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

	227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	Y	V	E	D	H	A	R	A	L	Y	C	V	A	T	T	G	K	V	G	E	T	Y	N	I	G	G	H	N	E	R	K	N	L	D	V	V	E	T	I	C	E	L	L	E	E	L	A	P	N	K	P	H	G	V	A	H	Y	R	D	L	I	T	F	V	A	D	R	P	G	H	D	L	R	Y	A	I	D	A	S
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence	V	S	A	V	D	I	G	L	L	H	L	G	C	L	V	L	P	Q	I	E	R	R	R	V	Y	G	T	A	G	T	F	D	W	N	T	V	L	A	T	F	R	K	L	Y	P	S	K	T	F	P	A	D	F	P	.	.	.	.	.	.	.	.	.	.	.	D	Q	G	Q	D	L	S	K	F	D	T	A	P	S	L
Template Known Secondary structure																	T	T			S																								T	T	S								.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.												.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

	307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	K	I	A	R	E	L	G	W	L	P	Q	E	T	F	E	S	G	M	R	K	T	V	Q	W	Y	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence	E	I	L	K	S	L	G	R	P	G	W	R	S	I	E	E	S	I	K	D	L	V	G	S	E	T	A
Template Known Secondary structure						T	T			S															S
Template Predicted Secondary structure
Template SS confidence
	317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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