Return to main results Retrieve Phyre Job Id

Job DescriptionP27830
Confidence100.00%DateThu Jan 5 11:44:08 GMT 2012
Rank22Aligned Residues316
% Identity21%Templated1rpna_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL
Query Conservation 
 










  

  

  
  
    
                      
  

 
                   
Alig confidence 






































.







































Template Conservation 
 










  

  

  
  
    
       .           
  
  

 
                   
Template Sequence  RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR. WRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL
Template Known Secondary structure 
TTTSTT



SS


.TT
GGG

TT


S
Template Predicted Secondary structure 













.
















Template SS confidence 















































































   3......10.........20.........30.........40. ........50.........60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 




















































Query SS confidence 















































































Query Sequence  AAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYS
Query Conservation 
                         
                        
                            
Alig confidence 






































..........






























Template Conservation                                         ..........                               
Template Sequence  AAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETR. . . . . . . . . . FYQASTSEMFGLIQAERQDENTPFYPRSPYG
Template Known Secondary structure 
S


TTST
TTS..........GGGG
S
SSSSB
TTS




S
Template Predicted Secondary structure 














..........


















Template SS confidence 















































































   82.......90.........100.........110.........120 .........130.........140.........150.
 
   162.......170.........180.........190.........200..... ....210.........220.........230.......
Predicted Secondary structure 


























....















Query SS confidence 











































. . . .































Query Sequence  ASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMI. . . . LNALAGKSLPVYGNGQQIRDWLYVEDHARALY
Query Conservation                                              ....                       
 
 
    
Alig confidence 











































....































Template Conservation                          
     
                                                 
Template Sequence  VAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMW
Template Known Secondary structure 





TTS
TTSTTS
S
S
TT

Template Predicted Secondary structure 







































Template SS confidence 















































































   152.......160.........170.........180.........190.........200.........210.........220.........230.
 
   238.240.........250.........260.........270.........280.........290.........300.........310.......
Predicted Secondary structure 

















































Query SS confidence 















































































Query Sequence  CVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQ
Query Conservation               
      
  
    
    
                                
  

   

  
 
Alig confidence 





.








































........























Template Conservation        .                
    
    
              ........          
  

   

  
 
Template Sequence  LMLQQD. KADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFF. . . . . . . . RPAEVDVLLGNPAKAQRVLGWKPR
Template Known Secondary structure  SS.S




S
TTT

GGGT
GGG
........
SS


B

B
T




Template Predicted Secondary structure 



.






















........












Template SS confidence 















































































   232..... ..240.........250.........260.........270........ .280.........290.........300..
 
   318.320.........330.......
Predicted Secondary structure 

Query SS confidence 



















Query Sequence  ETFESGMRKTVQWYLANESW
Query Conservation    
 
 
     
       
Alig confidence 



















Template Conservation    
 
 
   
        
Template Sequence  TSLDELIRMMVEADLRRVSR
Template Known Secondary structure  S
Template Predicted Secondary structure 



Template SS confidence 



















   303......310.........320..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions