Return to main results Retrieve Phyre Job Id

Job DescriptionP27830
Confidence99.90%DateThu Jan 5 11:44:08 GMT 2012
Rank67Aligned Residues290
% Identity16%Templated1qyda_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40. ........50.........60.........70.........80
Predicted Secondary structure 













.















Query SS confidence 







































.






































Query Sequence  RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNL. MSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH
Query Conservation 
 










  

  

  
  
    
        .              
  

 
                  
Alig confidence 







































.






























..





Template Conservation   








 

  
   
   
  
  
 
                          
         
   ..   
  
Template Sequence  SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQ. . VDVVIS
Template Known Secondary structure 

STTSTTTT



S

SS
TTT



SS
TT..
S
Template Predicted Secondary structure 























..

Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70...... ...80..
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 



















































Query SS confidence 















































































Query Sequence  LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY
Query Conservation   
                         
                        
                           
Alig confidence 








...........




























.....................









Template Conservation           ...........          

           

    .....................          
Template Sequence  ALAGGVLSH. . . . . . . . . . . HILEQLKLVEAIKEAGNIKRFLPSEFGMD. . . . . . . . . . . . . . . . . . . . . PDIMEHALQP
Template Known Secondary structure 



SSSST...........TTTTS


S
S

SS
.....................TTS




SS
Template Predicted Secondary structure 







...........




.....................









Template SS confidence 















































































   83......90. ........100.........110.........120 .........130
 
   161........170.........180.........190.........200.........210.........220.........230.........240
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVA
Query Conservation                                                                      
 
 
       
Alig confidence 




































..








































Template Conservation     
   
   
           


     
     ..                           
   


      
Template Sequence  GSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGS. . LAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSI
Template Known Secondary structure  TTTT

B


TTT..SS
TT

SS

SS

BTTS
S
T
Template Predicted Secondary structure 












..









Template SS confidence 















































































   131........140.........150.........160....... ..170.........180.........190.........200........
 
   241...... ..250.........260.........270.........280.........290.........300. ..
Predicted Secondary structure 






..



































...............
Query SS confidence 






. .





















































. . . . . . . . . . . . . . .

Query Sequence  TTGKVGE. . TYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRY. . . . . . . . . . . . . . . AI
Query Conservation         ..   
      
  
    
    
                              ...............  
Alig confidence 






..





















































...............

Template Conservation                     
  
         
       
                                       
Template Sequence  DDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGP
Template Known Secondary structure  T
GGGSSS


GGGT




B
STTS
TTTTTTTS
TTTSS


S
Template Predicted Secondary structure 































Template SS confidence 















































































   209210.........220.........230.........240.........250.........260.........270.........280........
 
   304.....310.. .......320........
Predicted Secondary structure 
.






Query SS confidence 








.















Query Sequence  DASKIAREL. GWLPQETFESGMRKTV
Query Conservation 
  

   
.
  
   
 
 
    
Alig confidence 








.



.










Template Conservation           

   . 
 
  
   
Template Sequence  NAIEATKLYPEVKY. VTMDSYLERYV
Template Known Secondary structure  S
TTS

.

TTT
Template Predicted Secondary structure 









.


Template SS confidence 

























   289290.........300.. .......310...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions