Return to main results Retrieve Phyre Job Id

Job DescriptionP27830
Confidence100.00%DateThu Jan 5 11:44:08 GMT 2012
Rank10Aligned Residues326
% Identity24%Templated1n7ha_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL
Query Conservation 
 










  

  

  
  
    
                      
  

 
                   
Alig confidence 










































...

































Template Conservation 
 










  

  

  
  
    
           ...     
     

 
                   
Template Sequence  KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRIN. . . HIYALMKLHYADLTDASSLRRWIDVIKPDEVYNL
Template Known Secondary structure 
TTTSTT



SS


TTTT...TT




TT


S
Template Predicted Secondary structure 













...
















Template SS confidence 















































































   2930.........40.........50.........60.........70. ........80.........90.........100.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 




















































Query SS confidence 















































































Query Sequence  AAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYS
Query Conservation 
                         
                        
                            
Alig confidence 







































.......
































Template Conservation 

                                      .......                                 
Template Sequence  AAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGR. . . . . . . TVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYA
Template Known Secondary structure 
S


ST

.......

GGGGTTS
SSB
TTS




S
Template Predicted Secondary structure 











.......

























Template SS confidence 















































































   114.....120.........130.........140.........150... ......160.........170.........180......
 
   162.......170.........180.........190.........200....... ..210.........220.........230.......
Predicted Secondary structure 


























....















Query SS confidence 













































. . . .





























Query Sequence  ASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILN. . . . ALAGKSLPVYGNGQQIRDWLYVEDHARALY
Query Conservation                                                ....                     
 
 
    
Alig confidence 













































....





























Template Conservation                                
                                        
 
      
Template Sequence  ASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMW
Template Known Secondary structure 




TTS
TTSTS


S
TT

Template Predicted Secondary structure 


































Template SS confidence 















































































   187..190.........200.........210.........220.........230.........240.........250.........260......
 
   238.240.........250.........260.........270.........280.........290.........300.........310.......
Predicted Secondary structure 

















































Query SS confidence 















































































Query Sequence  CVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQ
Query Conservation               
      
  
    
    
                                
  

   

  
 
Alig confidence 






.
































........






























Template Conservation         .     
      
  
    
    
       ........                 
  
    

  
 
Template Sequence  LMLQQEK. PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYV. . . . . . . . EIDQRYFRPAEVDNLQGDASKAKEVLGWKPQ
Template Known Secondary structure  TSSS.



S
TT

GGGT........
GGGS
SS


B

B






Template Predicted Secondary structure 



.














........


















Template SS confidence 















































































   267..270... ......280.........290.........300...... ...310.........320.........330.......
 
   318.320.........330.........340......
Predicted Secondary structure 





Query SS confidence 




























Query Sequence  ETFESGMRKTVQWYLANESWWKQVQDGSY
Query Conservation    
 
 
     
                
Alig confidence 




























Template Conservation    
 
 
        
   
         
Template Sequence  VGFEKLVKMMVDEDLELAKREKVLVDAGY
Template Known Secondary structure  S
TT
Template Predicted Secondary structure 






Template SS confidence 




























   338.340.........350.........360......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions