Return to main results Retrieve Phyre Job Id

Job DescriptionP27830
Confidence100.00%DateThu Jan 5 11:44:08 GMT 2012
Rank19Aligned Residues309
% Identity22%Templated1db3a_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL
Query Conservation 
 










  

  

  
  
    
                      
  

 
                   
Alig confidence 
































.................





























Template Conservation 
 










  

  
   
  
    
 .................       

 
             
 


 
Template Sequence  KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRP. . . . . . . . . . . . . . . . . KFHLHYGDLSDTSNLTRILREVQPDEVYNL
Template Known Secondary structure 
TTTSTT



.................




SS


S
Template Predicted Secondary structure 









.................











Template SS confidence 















































































   2.......10.........20.........30.... .....40.........50.........60....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 




















































Query SS confidence 















































































Query Sequence  AAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYS
Query Conservation 
                         
                        
                            
Alig confidence 


























........












































Template Conservation 

                         ........                                             
Template Sequence  GAMSHVAVSFESPEYTADVDAMGTLRL. . . . . . . . LEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYA
Template Known Secondary structure 



TTTTTTS
T........TT
TTT
GGGGTT

SSSB
TTS




S
Template Predicted Secondary structure 



















........

































Template SS confidence 















































































   86...90.........100.........110.. .......120.........130.........140.........150.......
 
   162.......170.........180.........190.........200...... ...210.........220.........230.......
Predicted Secondary structure 


























....















Query SS confidence 












































. . . .






























Query Sequence  ASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMIL. . . . NALAGKSLPVYGNGQQIRDWLYVEDHARALY
Query Conservation                                               ....                      
 
 
    
Alig confidence 












































....






























Template Conservation                                
                                        
 
 
    
Template Sequence  VAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW
Template Known Secondary structure 





TTS
TTSTTS


S
TT


Template Predicted Secondary structure 






























Template SS confidence 















































































   158.160.........170.........180.........190.........200.........210.........220.........230.......
 
   238.240.........250.........260.........270.........280.........290.. .......
Predicted Secondary structure 




































..................






Query SS confidence 






















































. . . . . . . . . . . . . . . . . .






Query Sequence  CVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVA. . . . . . . . . . . . . . . . . . DRPGHDL
Query Conservation               
      
  
    
    
                     ..................       
Alig confidence 






.














































..................






Template Conservation         .     
      
            
                                              
Template Sequence  MMLQQEQ. PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEE
Template Known Secondary structure  TTSSSS.







TTTS
GGG

SSS
TT

TT

GGG





Template Predicted Secondary structure 


.



































Template SS confidence 















































































   238.240.... .....250.........260.........270.........280.........290.........300.........310......
 
   300.........310.........320.........330......
Predicted Secondary structure 







Query SS confidence 




































Query Sequence  RYAIDASKIARELGWLPQETFESGMRKTVQWYLANES
Query Conservation      
  

   

  
   
 
 
     
      
Alig confidence 




































Template Conservation      
  
    

  
   


 
   
   

  
Template Sequence  TLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAK
Template Known Secondary structure 


B






S
Template Predicted Secondary structure 







Template SS confidence 




































   318.320.........330.........340.........350....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions