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Job DescriptionP27830
Confidence98.65%DateThu Jan 5 11:44:08 GMT 2012
Rank244Aligned Residues233
% Identity9%Templatec3tl3A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:short-chain type dehydrogenase/reductase; PDBTitle: structure of a short-chain type dehydrogenase/reductase from2 mycobacterium ulcerans
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  ILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAA
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Template Sequence  AVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVA. . . . . . . DLGDRARFAAADVTDEAAVASALDLAETMGTLRIVV
Template Known Secondary structure  TTTST
SS
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TT
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   8.10.........20.........30.........40.... .....50.........60.........70.........80
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  ESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSAS
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Template Sequence  NCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVNAEERGVIINTASVADGQIGQAAYSASKG
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GGGST


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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  KASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVATTG
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Template Sequence  GVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLPEEARASLGKQVP. . . . . . . . . . . . HPSRLGNPDEYGALAVHIIENP
Template Known Secondary structure  GGGT
SB

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   165....170.........180.........190.........200.........210 .........220.........230..
 
   244.....250.....
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Query Sequence  KVGETYNIGGHN
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Template Sequence  MLNGEVIRLDGA
Template Known Secondary structure  T

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   236...240.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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