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Job DescriptionP27830
Confidence100.00%DateThu Jan 5 11:44:08 GMT 2012
Rank33Aligned Residues320
% Identity19%Templatec3slgB_
PDB info PDB header:transferaseChain: B: PDB Molecule:pbgp3 protein; PDBTitle: crystal structure of pbgp3 protein from burkholderia pseudomallei
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20..... ....30.........40.........50.........60.........70.........
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Query Sequence  MRKILITGGAGFIGSALVRYIINET. SDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVM
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Template Sequence  AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL. . . . . . GDLVKHERMHFFEGDITINKEWVEYHVKKCDVIL.
Template Known Secondary structure 

S
SS


S

TTS......GGGGGSTT

TTT

S.
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   3......10.........20.........30.........40. ........50.........60.........70.....
 
   80.........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSP
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Template Sequence  PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPST. . . . . . SEVYGMCADEQFDPDASALTYGPINKPRW
Template Known Secondary structure 
B




TTTTT


......GGGGBS


SSB
TTT


B


TT
GGG
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   76...80.........90.........100.........110.........120 .........130.........140.........
 
   160.........170.........180.........190.........200 .........210.........220.........230.
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Query Sequence  YSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKL. . . . . . . . IPLMILNALAGKSLPVYGNGQQIRDWLYVED
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Template Sequence  IYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDD
Template Known Secondary structure  TTT

S
SS


TT

BS
S
TT

GGGG


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   150.........160.........170.........180.........190.........200.........210.........220.........
 
   232.......240...... ...250.........260.........270.........280.........290.........300.......
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Query Sequence  HARALYCVATTGKVG. . . . ETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYAIDASK
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Template Sequence  GISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSA. . . . . . . . . . KRVKLVETQNRVPKIEN
Template Known Secondary structure 
GGGTTTT

TTST
..........T






B

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   230.........240.........250.........260.........270.........280.. .......290.........
 
   308.310.........320.........330.........340...
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Query Sequence  IARELGWLPQETFESGMRKTVQWYLANESWWKQVQD
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Template Sequence  TMQELGWAPQFTFDDALRQIFEAYRGHVADARALVE
Template Known Secondary structure  T





TT
GGG
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   313......320.........330.........340........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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