Job Description P27830 Confidence 99.97% Date Thu Jan 5 11:44:08 GMT 2012 Rank 51 Aligned Residues 278 % Identity 17% Template c3sc6F_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:dtdp-4-dehydrorhamnose reductase; PDBTitle: 2.65 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose2 reductase (rfbd) from bacillus anthracis str. ames in complex with3 nadp Resolution 2.65 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	K	I	L	I	T	G	G	A	G	F	I	G	S	A	L	V	R	Y	I	I	N	E	T	S	D	A	V	V	V	V	D	K	L	T	Y	A	G	N	L	M	S	L	A	P	V	A	Q	S	E	R	F	A	F	E	K	V	D	I	C	D	R	A	E	L	A	R	V	F	T	E	H	Q	P	D	C	V	M	H
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	R	V	I	I	T	G	A	N	G	Q	L	G	K	Q	L	Q	E	E	L	N	P	E	E	Y	D	I	Y	P	F	D	K	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	I	T	N	I	S	Q	V	Q	Q	V	V	Q	E	I	R	P	H	I	I	I	H
Template Known Secondary structure									T	T	T	S										S		T	T	T								T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T															S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																							.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	E	S	H	V	D	R	S	I	D	G	P	A	A	F	I	E	T	N	I	V	G	T	Y	T	L	L	E	A	A	R	A	Y	W	N	A	L	T	E	D	K	K	S	A	F	R	F	H	H	I	S	T	D	E	V	Y	G	D	L	H	S	T	D	D	F	F	T	E	T	T	P	Y	A	P	S	S	P	Y
Query Conservation
Alig confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	A	A	Y	T	K	V	D	Q	A	E	K	E	R	D	L	A	Y	V	I	N	A	I	G	A	R	N	V	A	V	A	S	Q	L	V	G	A	K	L	V	Y	I	S	T	D	Y	V	F	Q	G	D	R	P	E	G	Y	D	E	F	H	N	P	A	P	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T	G	G	G	T										T														T									S	T	T	S					S	S		B		T	T	S					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	S	K	A	S	S	D	H	L	V	R	A	W	L	R	T	Y	G	L	P	T	L	I	T	N	C	S	N	N	Y	G	P	Y	H	F	P	E	K	L	I	P	L	M	I	L	N	A	L	A	G	K	S	L	P	V	Y	G	N	G	Q	Q	I	R	D	W	L	Y	V	E	D	H	A	R	A	L	Y	C	V	A
Query Conservation
Alig confidence		.																																				.	.	.	.
Template Conservation		.																																				.	.	.	.
Template Sequence		.	N	I	Y	G	A	S	K	Y	A	G	E	Q	F	V	K	E	L	H	N	K	Y	F	I	V	R	T	S	W	L	Y	G	K	Y	G	N	.	.	.	.	N	F	V	K	T	M	I	R	L	G	K	E	R	E	E	I	S	V	V	A	D	Q	I	G	S	P	T	Y	V	A	D	L	N	V	M	I	N	K	L	I
Template Known Secondary structure		.	S																		S	S								S				S	S	S		.	.	.	.														S							S																			T
Template Predicted Secondary structure		.																																				.	.	.	.
Template SS confidence
			125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	G	K	V	G	E	T	Y	N	I	G	G	H	N	E	R	K	N	L	D	V	V	E	T	I	C	E	L	L	E	E	L	A	P	N	K	P	H	G	V	A	H	Y	R	D	L	I	T	F	V	A	D	R	P	G	H	D	L	R	Y	A	I	D	A	S	K	I	A	R	E	L	G	W	L	P	Q	E	T	F
Query Conservation
Alig confidence					.																																														.	.	.	.	.	.	.															.
Template Conservation					.																																														.	.	.	.	.	.	.															.
Template Sequence		H	T	S	.	L	Y	G	T	Y	H	V	S	N	T	G	S	C	S	W	F	E	F	A	K	K	I	F	S	Y	A	N	M	K	V	N	V	L	P	V	S	T	E	E	F	G	A	A	A	A	.	.	.	.	.	.	.	R	P	K	Y	S	I	F	Q	H	N	M	L	R	L	.	N	G	F	L	Q	M	P	S	W
Template Known Secondary structure		T	T		.										B	S															T	T														T		S	S		.	.	.	.	.	.	.			S				B								.	T	T						B
Template Predicted Secondary structure					.																																														.	.	.	.	.	.	.															.
Template SS confidence
		200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.								.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270
		321	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	G	M	R	K	T	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	G	L	E	R	F	F	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions