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Job DescriptionP27830
Confidence99.06%DateThu Jan 5 11:44:08 GMT 2012
Rank108Aligned Residues236
% Identity13%Templatec3rihB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short chain dehydrogenase or reductase; PDBTitle: crystal structure of a putative short chain dehydrogenase or reductase2 from mycobacterium abscessus
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70. .....
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Query Sequence  RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFT. . . . . EHQPD
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Template Sequence  RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALD
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TTTTSTT
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   20.........30.........40.........50.........60.........70.........80.........90.........
 
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Query Sequence  CVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAP
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Template Sequence  VVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGW. . . . . . . . . . . .
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   100.........110.........120.........130.........140.........150.........160.......
 
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Query Sequence  SSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARAL
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Template Sequence  . SHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPM. . . . . . . . GMLGSPVDIGHLA
Template Known Secondary structure  .GGGT

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   168.170.........180.........190.........200.........210.........220..... ....230........
 
   237..240 .........250........
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Query Sequence  YCVA. . . TTGKVGETYNIGGHNERK
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Template Sequence  AFLATDEAGYITGQAIVVDGGQVLP
Template Known Secondary structure  SGGGTT

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STTTT

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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