Return to main results Retrieve Phyre Job Id

Job DescriptionP27830
Confidence98.53%DateThu Jan 5 11:44:08 GMT 2012
Rank272Aligned Residues189
% Identity14%Templatec3rd5A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:mypaa.01249.c; PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium paratuberculosis
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL
Query Conservation 
 










  

  

  
  
    
                      
  

 
                   
Alig confidence 










































....
































Template Conservation 
 






 


 
 
  
   
  

   
           ....                                 
Template Sequence  RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAART. . . . MAGQVEVRELDLQDLSSVRRFADGVSGADVLIN
Template Known Secondary structure 


SSTT
S
TT....SSS

TT
T


Template Predicted Secondary structure 









....






















Template SS confidence 















































































   15....20.........30.........40.........50....... ..60.........70.........80.........90
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 




















































Query SS confidence 















































































Query Sequence  AAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYS
Query Conservation 
                         
                        
                            
Alig confidence 




























......












































Template Conservation                               ......                                           
 
Template Sequence  NAGIMAVPYALTVDGFESQIGTNHLGHFA. . . . . . LTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYS
Template Known Secondary structure 




S



B
TTS
BT......GGG

GGGTT



SS
TT
SSS


Template Predicted Secondary structure 



















......




















Template SS confidence 















































































   91........100.........110......... 120.........130.........140.........150.........160....
 
   162.......170.........180.........190.........200
Predicted Secondary structure 

























Query SS confidence 






































Query Sequence  ASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKL
Query Conservation                                         
Alig confidence 






































Template Conservation   

 
       

 

      
 
  
 

 
 
   
Template Sequence  QSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLA
Template Known Secondary structure  TT




SGGGS


Template Predicted Secondary structure 












Template SS confidence 






































   165....170.........180.........190.........200...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions