Job Description P27830 Confidence 98.95% Date Thu Jan 5 11:44:08 GMT 2012 Rank 137 Aligned Residues 218 % Identity 17% Template c3o38D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase from mycobacterium2 smegmatis Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.	.
Predicted Secondary structure													.																																																												.	.	.	.	.
Query SS confidence													.																																																												.	.	.	.	.
Query Sequence		R	K	I	L	I	T	G	G	A	G	F	.	I	G	S	A	L	V	R	Y	I	I	N	E	T	S	D	A	V	V	V	V	D	K	L	T	Y	A	G	N	L	M	S	L	A	P	V	A	Q	S	E	R	F	A	F	E	K	V	D	I	C	D	R	A	E	L	A	R	V	F	T	.	.	.	.	.	E	H	Q	P
Query Conservation													.																																																												.	.	.	.	.
Alig confidence													.																																																												.	.	.	.	.
Template Conservation
Template Sequence		K	V	V	L	V	T	A	A	A	G	T	G	I	G	S	T	T	A	R	R	A	L	L	E	G	A	D	V	V	I	S	D	Y	H	E	R	R	L	G	E	T	R	D	Q	L	A	D	L	G	L	G	R	V	E	A	V	V	C	D	V	T	S	T	E	A	V	D	A	L	I	T	Q	T	V	E	K	A	G	R	L
Template Known Secondary structure							S	S		S	S	S	S												T	T								S														T	T	S	S	S									T	T																	S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	C	V	M	H	L	A	A	E	S	H	V	D	R	S	I	D	G	P	A	A	F	I	E	T	N	I	V	G	T	Y	T	L	L	E	A	A	R	A	Y	W	N	A	L	T	E	D	K	K	S	A	F	R	F	H	H	I	S	T	D	E	V	Y	G	D	L	H	S	T	D	D	F	F	T	E	T	T	P	Y	A
Query Conservation
Alig confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	L	V	N	N	A	G	L	G	G	Q	T	P	V	V	D	M	T	D	E	E	W	D	R	V	L	N	V	T	L	T	S	V	M	R	A	T	R	A	A	L	R	Y	F	R	G	V	D	H	G	G	V	I	V	N	N	A	S	V	L	G	W	R	A	Q	H	S	Q	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																G	G	G														T																T	S	S											G	G	G	T				T	T		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	S	P	Y	S	A	S	K	A	S	S	D	H	L	V	R	A	W	L	R	T	Y	G	L	P	T	L	I	T	N	C	S	N	N	Y	G	P	Y	H	F	P	E	K	L	I	P	L	M	I	L	N	A	L	A	G	K	S	L	P	V	Y	G	N	G	Q	Q	I	R	D	W	L	Y	V	E	D	H	A	R	A
Query Conservation
Alig confidence		.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	S	H	Y	A	A	A	K	A	G	V	M	A	L	T	R	C	S	A	I	E	A	V	E	F	G	V	R	I	N	A	V	S	P	S	I	A	R	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	F	G	R	A	A	E	P	W	E	V	A	A	T
Template Known Secondary structure		.	.																						G	G	G	T															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S	S
Template Predicted Secondary structure		.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																									.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		236	.	.	.	240	.	.	.				.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		L	Y	C	V	A	T	T	G	.	.	.	K	V	G	E	T	Y	N	I	G	G	H	N	E
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		I	A	F	L	A	S	D	Y	S	S	Y	M	T	G	E	V	V	S	V	S	S	Q	R	A
Template Known Secondary structure							S	G	G	G	T	T			S						S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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