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Job DescriptionP27830
Confidence98.70%DateThu Jan 5 11:44:08 GMT 2012
Rank229Aligned Residues228
% Identity17%Templatec3nugA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-(acyl-carrier protein) reductase; PDBTitle: crystal structure of wild type tetrameric pyridoxal 4-dehydrogenase2 from mesorhizobium loti
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70... ..
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Query Sequence  RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH. . . . . . QP
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Template Sequence  KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAAS. . . . IGKKARAIAADISDPGSVKALFAEIQALTGGID
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Query Sequence  DCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYA
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Template Sequence  ILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMA. . . . . . . . . . .
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   84.....90.........100.........110.........120.........130.........140.........150..
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
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Query Sequence  PSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARA
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Template Sequence  . . . AYVAAKGGVIGFTRALATELGKYNITANAVT. . . . . . . PGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADV
Template Known Secondary structure  ...GGGT.......
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   153......160.........170.........180... ......190.........200.........210.........220..
 
   236...240... ......250....
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Query Sequence  LYCVATTG. . . KVGETYNIGGH
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Template Sequence  VSFLASDDARWITGQTLNVDAG
Template Known Secondary structure  SGGGTT

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   223......230.........240....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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