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Job DescriptionP27830
Confidence99.13%DateThu Jan 5 11:44:08 GMT 2012
Rank95Aligned Residues240
% Identity14%Templatec3m1aF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:putative dehydrogenase; PDBTitle: the crystal structure of a short-chain dehydrogenase from2 streptomyces avermitilis to 2a
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL
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Template Sequence  KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA. . . . YPDRAEAISLDVTDGERIDVVAADVLARYGRVD
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TTTTSTT
SSGGGG....
TTT

TT
S

S
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   6...10.........20.........30.........40........ .50.........60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  AAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYS
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Template Sequence  VLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRAL. . . . . . . . . LPQXRERGSGSVVNISSFGGQLSFAGFSAYS
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GGG

T.........T


GGGT


TT
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   82.......90.........100.........110.........120. ........130.........140.........150..
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  ASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVAT
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Template Sequence  ATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQQPGDPAKAAAAIRLALD
Template Known Secondary structure  GGGT

B

TTT







TTT


B
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   153......160.........170.........180.........190.........200.........210.........220.........230..
 
   242.......250....
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Query Sequence  TGKVGETYNIGGH
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Template Sequence  TEKTPLRLALGGD
Template Known Secondary structure  SSS

SS
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   238.240.........250
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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