Job Description P27830 Confidence 97.64% Date Thu Jan 5 11:44:08 GMT 2012 Rank 308 Aligned Residues 61 % Identity 16% Template c3l4bG_ PDB info PDB header:transport protein Chain: G: PDB Molecule:trka k+ channel protien tm1088b; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 3.45 Å

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Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	K	I	L	I	T	G	G	A	G	F	I	G	S	A	L	V	R	Y	I	I	N	E	T	S	D	A	V	V	V	V	D	K	L	T	Y	A	G	N	L	M	S	L	A	P	V	A	Q	S	E	R	F	A	F	E	K	V	D	I	C	D	R	A	E	L	A	R	V
Query Conservation
Alig confidence				.							.																																				.	.	.	.	.	.
Template Conservation				.							.																																				.	.	.	.	.	.
Template Sequence		M	K	.	V	I	I	I	G	G	.	E	T	T	A	Y	Y	L	A	R	S	M	L	S	R	K	Y	G	V	V	I	I	N	K	D	R	E	L	C	E	E	F	A	K	K	L	.	.	.	.	.	.	K	A	T	I	I	H	G	D	G	S	H	K	E	I	L	R	D	A
Template Known Secondary structure				.							.														T	T								S												S	.	.	.	.	.	.	S	S					S		T	T	S
Template Predicted Secondary structure				.							.																																				.	.	.	.	.	.
Template SS confidence
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No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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