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Job DescriptionP27830
Confidence98.75%DateThu Jan 5 11:44:08 GMT 2012
Rank211Aligned Residues215
% Identity15%Templatec3kvoB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:hydroxysteroid dehydrogenase-like protein 2; PDBTitle: crystal structure of the catalytic domain of human hydroxysteroid2 dehydrogenase like 2 (hsdl2)
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40...... ...50.........60.........70...
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Query Sequence  RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAP. . . . . . VAQSERFAFEKVDICDRAELARVFTEH. .
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Template Sequence  CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIK
Template Known Secondary structure 
T
SSTTT
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TT
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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   74.....80.........90.........100.........110.........120.........130.........140.........150
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Query Sequence  . . . QPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTE
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Template Sequence  KFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCA. . .
Template Known Secondary structure  S











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   91........100.........110.........120.........130.........140.........150.........160.......
 
   151........160.........170.........180.........190.........200.........210.........220.........230
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Query Sequence  TTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVE
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Template Sequence  . . . . . . . . . YTIAKYGMSMYVLGMAEEFKGEIAVNALWP. . . . . . . . KTAIHTAAMDMLGGPGIE. . . . . . . . SQCRKVD
Template Known Secondary structure  .........TTTT

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B


TTGG........GG
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   168.170.........180.........190....... ..200.........210..... ....220..
 
   231........240....
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Query Sequence  DHARALYCVATTGK
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Template Sequence  IIADAAYSIFQKPK
Template Known Secondary structure  TS
T
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   223......230......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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