Job Description P27830 Confidence 99.91% Date Thu Jan 5 11:44:08 GMT 2012 Rank 65 Aligned Residues 280 % Identity 13% Template c3i5mA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative leucoanthocyanidin reductase 1; PDBTitle: structure of the apo form of leucoanthocyanidin reductase from vitis2 vinifera Resolution 2.72 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	L	I	T	G	G	A	G	F	I	G	S	A	L	V	R	Y	I	I	N	E	T	S	D	A	V	V	V	V	D	K	L	T	Y	A	G	N	L	M	S	L	A	P	V	A	Q	S	E	R	F	A	F	E	K	V	D	I	C	D	R	A	E	L	A	R	V	F	T	E	H	Q	P	D	C	V	M	H	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	L	I	A	G	A	T	G	F	I	G	Q	F	V	A	T	A	S	L	D	A	H	R	P	T	Y	I	L	A	R	P	G	P	R	S	P	S	K	A	K	I	F	K	A	L	E	D	K	G	A	I	I	V	Y	G	L	I	N	E	Q	E	A	M	E	K	I	L	K	E	H	E	I	D	I	V	V	S	T	V
Template Known Secondary structure								T	T	S													T	T									S	S																T	T								T	T													T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	S	H	V	D	R	S	I	D	G	P	A	A	F	I	E	T	N	I	V	G	T	Y	T	L	L	E	A	A	R	A	Y	W	N	A	L	T	E	D	K	K	S	A	F	R	F	H	H	I	S	T	D	E	V	Y	G	D	L	H	S	T	D	D	F	F	T	E	T	T	P	Y	A	P	S	S	P	Y	S	A
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	E	S	I	L	D	Q	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	K	A	M	K	A	V	G	T	I	K	R	F	L	P	S	E	F	G	H	D	V	N	R	A	D	P	V	E	P	G	L	N	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	S	G	G	G				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S					S			S	S		T	T	T					T	T				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.																									.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	A	S	S	D	H	L	V	R	A	W	L	R	T	Y	G	L	P	T	L	I	T	N	C	S	N	N	Y	G	P	Y	H	F	P	E	K	L	I	P	L	M	I	L	N	A	L	A	G	K	S	L	P	V	Y	G	N	G	Q	Q	I	R	D	W	L	Y	V	E	D	H	A	R	A	L	Y	C	V	A	T	T
Query Conservation
Alig confidence		.																																						.	.	.	.	.	.	.	.
Template Conservation		.																																						.	.	.	.	.	.	.	.
Template Sequence		.	M	Y	R	E	K	R	R	V	R	Q	L	V	E	E	S	G	I	P	F	T	Y	I	C	C	N	S	I	A	S	W	P	Y	Y	N	N	V	L	.	.	.	.	.	.	.	.	P	P	T	D	F	F	Q	I	Y	G	D	G	N	V	K	A	Y	F	V	A	G	T	D	I	G	K	F	T	M	K	T	V	D	D
Template Known Secondary structure		.															T	T			B									S	S						.			.	.	.	.	.	.	.	.			S	S						T	T	S																				T	T
Template Predicted Secondary structure		.																																						.	.	.	.	.	.	.	.
Template SS confidence
			136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.									.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		243	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.																		.	.	.	.	300	.	.	.
Predicted Secondary structure							.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	V	G	E	.	.	T	Y	N	I	G	G	H	N	E	R	K	N	L	D	V	V	E	T	I	C	E	L	L	E	E	L	A	P	N	K	P	H	G	V	A	H	Y	R	D	L	I	T	F	V	A	D	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	D	L	R	Y	A	I
Query Conservation							.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	T	L	N	K	S	V	H	F	R	P	S	C	N	C	L	N	I	N	E	L	A	S	V	W	E	K	K	I	G	R	T	L	P	R	V	T	V	T	E	D	D	L	L	A	A	A	G	E	N	I	I	P	Q	S	V	V	A	A	F	T	H	D	I	F	I	K	G	C	Q	V	N	F	S	I	D	G	P	E
Template Known Secondary structure		G	G	G	T	T								G	G	G																T	S																	T	T			T	T													T	T		T	T	T	S	S				S	T	T
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	S	K	I	A	R	E	L	G	W	L	P	Q	E	T	F	E	S	G	M	R	K	T	V
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		D	V	E	V	T	T	L	Y	P	E	D	S	F	.	R	T	V	E	E	C	F	G	E	Y	I
Template Known Secondary structure									S	T	T				.											T
Template Predicted Secondary structure															.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions