Job Description P27830 Confidence 99.62% Date Thu Jan 5 11:44:08 GMT 2012 Rank 81 Aligned Residues 214 % Identity 12% Template c3h2sA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative nadh-flavin reductase; PDBTitle: crystal structure of the q03b84 protein from lactobacillus2 casei. northeast structural genomics consortium target3 lcr19. Resolution 1.78 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	L	I	T	G	G	A	G	F	I	G	S	A	L	V	R	Y	I	I	N	E	T	S	D	A	V	V	V	V	D	K	L	T	Y	A	G	N	L	M	S	L	A	P	V	A	Q	S	E	R	F	A	F	E	K	V	D	I	C	D	R	A	E	L	A	R	V	F	T	E	H	Q	P	D	C	V	M	H	L	A
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	A	V	L	G	A	T	G	R	A	G	S	A	I	V	A	E	A	R	R	R	G	H	E	V	L	A	V	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	Q	K	A	A	D	R	L	G	A	T	V	A	T	L	V	K	E	P	L
Template Known Secondary structure							T	T	T	S													T	T								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T		T	T	S							G	G
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.																													.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	S	H	V	D	R	S	I	D	G	P	A	A	F	I	E	T	N	I	V	G	T	Y	T	L	L	E	A	A	R	A	Y	W	N	A	L	T	E	D	K	K	S	A	F	R	F	H	H	I	S	T	D	E	V	Y	G	D	L	H	S	T	D	D	F	F	T	E	T	T	P	Y	A	P	S	S	P	Y	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	T	E	A	D	L	D	S	V	D	A	V	V	D	A	L	S	V	P	W	G	S	G	R	G	Y	L	H	L	D	F	A	T	H	L	V	S	L	L	R	N	S	D	T	L	A	V	F	I	L	G	S	A	S	L	A	X	P	G	A	D	H	P	X	I	L	D	F	P	E	S	A	A	S	Q	P	W	Y	D
Template Known Secondary structure		G							T	T		S										T	T	S	S		T													T		T	T											G	G	G	S	B		T	T		S	S		G	G	G	G			G	G	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	A	S	S	D	H	L	V	R	A	W	L	R	T	Y	G	L	P	T	L	I	T	N	C	S	N	N	Y	G	P	Y	H	F	P	E	K	L	I	P	L	M	I	L	N	A	L	A	G	K	S	L	P	V	Y	G	N	G	Q	Q	I	R	D	W	L	Y	V	E	D	H	A	R	A	L	Y	C	V	A	T	T
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	L	Y	Q	Y	Y	E	Y	Q	F	L	Q	X	N	A	N	V	N	W	I	G	I	S	P	S	E	A	F	P	S	G	P	A	T	S	Y	V	A	G	.	.	.	.	.	.	.	.	.	.	.	K	D	T	L	L	V	G	E	D	G	Q	S	H	I	T	T	G	N	X	A	L	A	I	L	D	Q	L	E	H
Template Known Secondary structure														T	T		T	T	S									S	B													.	.	.	.	.	.	.	.	.	.	.	S	S	B					T	T	S			B																S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.												.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		243	.		.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		G	K	.	V	G	E	T	Y	N	I	G	G	H	N
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		P	T	A	I	R	D	R	I	V	V	R	D	A	D
Template Known Secondary structure					T	T	S
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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