Job Description P27830 Confidence 99.07% Date Thu Jan 5 11:44:08 GMT 2012 Rank 107 Aligned Residues 230 % Identity 14% Template c3grkE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:enoyl-(acyl-carrier-protein) reductase (nadh); PDBTitle: crystal structure of short chain dehydrogenase reductase2 sdr glucose-ribitol dehydrogenase from brucella melitensis Resolution 2.35 Å

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		2	.	.	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.
Predicted Secondary structure												.	.																																																													.	.	.	.	.
Query SS confidence												.	.																																																													.	.	.	.	.
Query Sequence		R	K	I	L	I	T	G	G	A	G	.	.	F	I	G	S	A	L	V	R	Y	I	I	N	E	T	S	D	A	V	V	V	V	D	K	L	T	Y	A	G	N	L	M	S	L	A	P	V	A	Q	S	E	R	F	A	F	E	K	V	D	I	C	D	R	A	E	L	A	R	V	F	T	.	.	.	.	.	E	H	Q
Query Conservation												.	.																																																													.	.	.	.	.
Alig confidence												.	.																																						.	.																						.	.	.	.	.
Template Conservation																																																			.	.
Template Sequence		K	R	G	L	I	L	G	V	A	N	N	R	S	I	A	W	G	I	A	K	A	A	R	E	A	G	A	E	L	A	F	T	Y	Q	G	D	A	L	K	K	R	V	E	P	L	A	E	E	L	.	.	G	A	F	V	A	G	H	C	D	V	A	D	A	A	S	I	D	A	V	F	E	T	L	E	K	K	W	G	K
Template Known Secondary structure										S	S	T	T	S												T	T									T	T													T	.	.	T									T	T																	S
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	C	V	M	H	L	A	A	E	S	H	V	D	R	S	I	D	G	P	A	A	F	I	E	T	N	I	V	G	T	Y	T	L	L	E	A	A	R	A	Y	W	N	A	L	T	E	D	K	K	S	A	F	R	F	H	H	I	S	T	D	E	V	Y	G	D	L	H	S	T	D	D	F	F	T	E	T	T	P	Y
Query Conservation
Alig confidence																																																																											.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		L	D	F	L	V	H	A	I	G	F	S	D	K	D	E	L	T	G	R	Y	I	D	T	S	E	A	N	F	T	N	T	M	L	I	S	V	Y	S	L	T	A	V	S	R	R	A	E	K	L	M	A	D	G	G	S	I	L	T	L	T	Y	Y	G	A	E	K	V	M	P	N	Y	N	V	.	.	.	.	.	.	.
Template Known Secondary structure			S															T	S		G	G	G														T													T		T	T										G	G	G	T	S			T	T	T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	S	S	P	Y	S	A	S	K	A	S	S	D	H	L	V	R	A	W	L	R	T	Y	G	L	P	T	L	I	T	N	C	S	N	N	Y	G	P	Y	H	F	P	E	K	L	I	P	L	M	I	L	N	A	L	A	G	K	S	L	P	V	Y	G	N	G	Q	Q	I	R	D	W	L	Y	V	E	D	H	A	R
Query Conservation
Alig confidence		.	.	.	.	.																					.	.	.																																	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																					.	.	.																																	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	M	G	V	A	K	A	A	L	E	A	S	V	K	Y	L	A	V	D	L	G	.	.	.	P	Q	N	I	R	V	N	A	I	S	A	G	P	I	K	T	G	D	F	R	Y	I	L	K	W	N	E	Y	N	A	P	L	.	.	.	.	.	.	.	.	.	R	R	T	V	T	I	D	E	V	G	D
Template Known Secondary structure		.	.	.	.	.																				G	.	.	.	G	G	T											B																S	T	T	.	.	.	.	.	.	.	.	.	S	S		B
Template Predicted Secondary structure		.	.	.	.	.																					.	.	.																																	.	.	.	.	.	.	.	.	.
Template SS confidence
							162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.										.	.	.	.	.	.	220	.	.	.	.
		235	.	.	.	.	240	.	.	.				.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		A	L	Y	C	V	A	T	T	G	.	.	.	K	V	G	E	T	Y	N	I	G	G	H	N	E	R
Query Conservation											.	.	.
Alig confidence											.	.	.
Template Conservation
Template Sequence		V	G	L	Y	F	L	S	D	L	S	R	S	V	T	G	E	V	H	H	A	D	S	G	Y	H	V
Template Known Secondary structure								S	G	G	G	T	T			S						S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions