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Job DescriptionP27830
Confidence98.68%DateThu Jan 5 11:44:08 GMT 2012
Rank233Aligned Residues230
% Identity15%Templatec3emkA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glucose/ribitol dehydrogenase; PDBTitle: 2.5a crystal structure of glucose/ribitol dehydrogenase2 from brucella melitensis
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL
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Template Sequence  RKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSDREAVKALGQKAEEEMGGVDILVN
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  AAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYS
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Template Sequence  NAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTRELTHPMMRRRNGRIINITSIVGVTGNPGQ. . . . . . . . . . . . . ANYC
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   87..90.........100.........110.........120.........130.........140......... 150...
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  ASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVAT
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Template Sequence  ASKAGLIGFSKSLAQEIASRNVTVNCIAPGFIESAMEKQKDAIMGNIPMKR. . . . . . . . . . . . . MGVGADIAAAVVYLAS
Template Known Secondary structure  GGGT
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   154.....160.........170.........180.........190.........200.... .....210.........220
 
   242.. .....250.......
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Query Sequence  TGK. . . VGETYNIGGHNER
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Template Sequence  DEAAYVTGQTLHVNGGMAM
Template Known Secondary structure  GGGTT

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   226...230.........240....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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