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Job DescriptionP27830
Confidence100.00%DateThu Jan 5 11:44:08 GMT 2012
Rank43Aligned Residues300
% Identity15%Templatec3a1nB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:ndp-sugar epimerase; PDBTitle: crystal structure of l-threonine dehydrogenase from2 hyperthermophilic archaeon thermoplasma volcanium
Resolution2.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  ILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAA
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Template Sequence  ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQR. . . . . . . . . . DTGGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAG
Template Known Secondary structure  TTTS
GGGSS

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TT



TT
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   2.......10.........20.........30...... ...40.........50.........60.........70.
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  ESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSAS
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Template Sequence  ILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVI. . . . . . . . . . . PSTIGVFGPETPKNKVPSITITRPRTMYGVT
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TT

...........GGG

TTS
SSSB
SSS




S
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   72.......80.........90.........100......... 110.........120.........130.........140
 
   164.....170.........180.........190..... ....200.........210.........220.........230.........
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Query Sequence  KASSDHLVRAWLRTYGLPTLITNCSNNYGPYH. . . . FPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCV
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Template Sequence  KIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDL
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SSS




TTTTT
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TT

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   141........150.........160.........170.........180.........190.........200.........210.........220
 
   240....... ..250.........260.........270.........280.........290.........300.........310......
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Query Sequence  ATTGKVGE. . . TYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLP
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Template Sequence  YEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIEYKEDFRDKIAA. . . . . . . . . . TWPESLDSSEASNEWGFSI
Template Known Secondary structure  S
TTT
SS


S
TT
TT



..........TS
S
B





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   221........230.........240.........250.........260.........270. ........280.........290
 
   317..320.........330....
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Query Sequence  QETFESGMRKTVQWYLAN
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Template Conservation     
   
   
    
 
Template Sequence  EYDLDRTIDDMIDHISEK
Template Known Secondary structure  S

T
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   291........300........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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