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Job DescriptionP27830
Confidence98.75%DateThu Jan 5 11:44:08 GMT 2012
Rank214Aligned Residues226
% Identity12%Templatec2z1nA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:dehydrogenase; PDBTitle: crystal structure of ape0912 from aeropyrum pernix k1
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50. ........60.........70.........80
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Query Sequence  RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSE. RFAFEKVDICDRAELARVFTEHQPDCVMH
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Template Sequence  KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGAD
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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY
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Template Sequence  ILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIG. . . . . . . . . . SVTLLRPWQDLALS
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   88.90.........100.........110.........120.........130.........140... ......150.......
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVA
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Template Sequence  NIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRRI. . . . . . . . . . . . . . . . . . . . PMGRVGKPEELASVVAFLA
Template Known Secondary structure  TGGGT






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   158.160.........170.........180.........190........ .200.........210.......
 
   241... .....250.......
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Query Sequence  TTGK. . . VGETYNIGGHNER
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Template Sequence  SEKASFITGAVIPVDGGAHI
Template Known Secondary structure  SGGGTT

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   241........250.........260
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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