Return to main results Retrieve Phyre Job Id

Job DescriptionP27830
Confidence100.00%DateThu Jan 5 11:44:08 GMT 2012
Rank45Aligned Residues303
% Identity15%Templatec2yy7B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:l-threonine dehydrogenase; PDBTitle: crystal structure of thermolabile l-threonine dehydrogenase from2 flavobacterium frigidimaris kuc-1
Resolution2.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1. .......10.........20.........30.........40.........50.........60.........70.........
Predicted Secondary structure 

.




























Query SS confidence 

.












































































Query Sequence  MR. KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVM
Query Conservation 

. 










  

  

  
  
    
                      
  

 
                 
Alig confidence 

.









































.......



























Template Conservation 
 












  

  

  
  
 
              .......       
  
               
 
Template Sequence  MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN. . . . . . . SGPFEVVNALDFNQIEHLVEVHKITDIY
Template Known Secondary structure 



TTTS
GGGS


S
.......TS


TT
TT

Template Predicted Secondary structure 

















.......










Template SS confidence 















































































   1........10.........20.........30.........40..... ....50.........60.........70...
 
   80.........90.........100.........110.........120.........130.........140.........150.........
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSP
Query Conservation    
                         
                        
                          
Alig confidence 




























...........







































Template Conservation    

                         ...........                                        
Template Sequence  LMAALLSATAEKNPAFAWDLNMNSLFHVL. . . . . . . . . . . NLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTV
Template Known Secondary structure 





...........TTS
S

GGG

TTS
SSSB
SS





S
Template Predicted Secondary structure 

















...........































Template SS confidence 















































































   74.....80.........90.........100.. .......110.........120.........130.........140..
 
   160.........170.........180.........190....... ..200.........210.........220.........230.....
Predicted Secondary structure 
























....



















Query SS confidence 





































. . . .





































Query Sequence  YSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP. . . . EKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARA
Query Conservation                                        ....                               
 
 
  
Alig confidence 





































....





































Template Conservation                            
   
 
                                          
    
Template Sequence  YGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDA
Template Known Secondary structure 





SSS


S
SSTTSSS
TT

Template Predicted Secondary structure 






































Template SS confidence 















































































   143......150.........160.........170.........180.........190.........200.........210.........220..
 
   236...240........ .250.........260.........270.........280.........290.........300.........310..
Predicted Secondary structure 








...



































Query SS confidence 












. . .































































Query Sequence  LYCVATTGKVGET. . . YNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYAIDASKIAREL
Query Conservation               ...  
      
  
    
    
                                
  

   
Alig confidence 












...



























..........

























Template Conservation                           
  
    
    
     ..........                 
  

   
Template Sequence  TINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTIT. . . . . . . . . . YEPDFRQKIADSWPASIDDSQAREDW
Template Known Secondary structure  S
GGG


SS


S

TT
..........


TTS
SSB

Template Predicted Secondary structure 





















..........













Template SS confidence 















































































   223......230.........240.........250.........260...... ...270.........280.........290..
 
   313......320.........330.
Predicted Secondary structure 






Query SS confidence 


















Query Sequence  GWLPQETFESGMRKTVQWY
Query Conservation 
  
   
 
 
     
 
Alig confidence 


















Template Conservation 
  
   
   
   
  
Template Sequence  DWKHTFDLESMTKDMIEHL
Template Known Secondary structure 






Template Predicted Secondary structure 






Template SS confidence 


















   293......300.........310.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions