Job Description P27830 Confidence 100.00% Date Thu Jan 5 11:44:08 GMT 2012 Rank 21 Aligned Residues 322 % Identity 26% Template c2q1uA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:putative nucleotide sugar epimerase/ dehydratase; PDBTitle: crystal structure of the bordetella bronchiseptica enzyme wbmf in2 complex with nad+ and udp Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	I	L	I	T	G	G	A	G	F	I	G	S	A	L	V	R	Y	I	I	N	E	T	S	D	A	V	V	V	V	D	K	L	T	Y	A	G	N	L	M	S	L	A	P	V	A	Q	S	E	R	F	A	F	E	K	V	D	I	C	D	R	A	E	L	A	R	V	F	T	E	H	Q	P	D	C	V	M	H	L
Query Conservation
Alig confidence																																									.	.	.	.																													.	.
Template Conservation																																									.	.	.	.																													.	.
Template Sequence		T	N	V	M	V	V	G	G	A	G	F	V	G	S	N	L	V	K	R	L	L	E	L	G	V	N	Q	V	H	V	V	D	N	L	L	S	A	E	K	.	.	.	.	I	N	V	P	D	H	P	A	V	R	F	S	E	T	S	I	T	D	D	A	L	L	A	S	L	Q	D	E	.	.	Y	D	Y	V	F	H	L
Template Known Secondary structure								T	T	T	S													T	T		S									S	S			G	.	.	.	.	G	G	S				T	T						S		T	T										S		.	.		S
Template Predicted Secondary structure																																									.	.	.	.																													.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	E	S	H	V	D	R	S	I	D	G	P	A	A	F	I	E	T	N	I	V	G	T	Y	T	L	L	E	A	A	R	A	Y	W	N	A	L	T	E	D	K	K	S	A	F	R	F	H	H	I	S	T	D	E	V	Y	G	D	L	H	S	T	D	D	F	F	T	E	T	T	P	Y	A	P	S	S	P	Y	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	Y	H	G	N	Q	S	S	I	H	D	P	L	A	D	H	E	N	N	T	L	T	T	L	K	L	Y	E	R	L	K	H	F	K	R	L	K	K	V	V	Y	S	A	A	G	E	E	T	D	I	V	S	L	H	N	N	D	S	P	Y	S	M	S	K	I	F	G	E	F	Y	S	V	Y	Y	H	K	Q	H	Q
Template Known Secondary structure																						T											T	T		S	S																		S	S				S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	K	A	S	S	D	H	L	V	R	A	W	L	R	T	Y	G	L	P	T	L	I	T	N	C	S	N	N	Y	G	P	Y	H	F	P	E	K	L	I	P	L	M	I	L	N	A	L	A	G	K	S	L	P	V	Y	G	N	G	Q	Q	I	R	D	W	L	Y	V	E	D	H	A	R	A	L	Y	C	V	A	T
Query Conservation
Alig confidence										.	.	.	.	.
Template Conservation										.	.	.	.	.
Template Sequence		L	P	T	V	R	A	R	F	.	.	.	.	.	Q	N	V	Y	G	P	G	E	I	L	G	A	G	R	W	R	G	T	P	A	T	V	W	R	N	V	T	P	T	F	I	Y	K	A	L	K	G	M	P	L	P	L	E	N	G	G	V	A	T	R	D	F	I	F	V	E	D	V	A	N	G	L	I	A	C	A	A
Template Known Secondary structure										.	.	.	.	.						T	T			T	T		S	S			S	S	G	G	G	T	S													T	T						S	G	G	G
Template Predicted Secondary structure										.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	K	V	G	E	T	Y	N	I	G	G	H	N	E	R	K	N	L	D	V	V	E	T	I	C	E	L	L	E	E	L	A	P	N	K	P	H	G	V	A	H	Y	R	D	L	I	T	F	V	A	D	R	P	G	H	D	L	R	Y	A	I	D	A	S	K	I	A	R	E	L	G	W	L	P	Q	E	T	F	E
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	T	P	G	G	V	Y	N	I	A	S	G	K	E	T	S	I	A	D	L	A	T	K	I	N	E	I	T	G	N	N	T	E	L	D	R	L	P	.	.	.	.	.	.	.	.	.	.	.	K	R	P	W	D	N	S	G	K	R	F	G	S	P	E	K	A	R	R	E	L	G	F	S	A	D	V	S	I	D
Template Known Secondary structure					T	T																									T										.	.	.	.	.	.	.	.	.	.	.			T	T	T	S	T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.												.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	M	R	K	T	V	Q	W	Y	L	A	N	E	S	W	W	K	Q	V	Q	D	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	L	R	K	T	I	E	W	T	K	A	N	L	A	V	I	E	Q	I	M	R	K	H
Template Known Secondary structure														T										T	T
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions