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Job DescriptionP27830
Confidence99.16%DateThu Jan 5 11:44:08 GMT 2012
Rank92Aligned Residues239
% Identity9%Templatec2p68A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of aq_1716 from aquifex aeolicus vf5
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL
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Template Sequence  KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGID
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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  AAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYS
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Template Sequence  ILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNS. . . . . . . . . LRKMIKQRWGRIVNISSVVGFTGNVGQVNYS
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GGG

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   88.90.........100.........110.........120....... ..130.........140.........150........
 
   162.......170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  ASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVA.
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Template Sequence  TTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIP. . . . . . . . LGRFGSPEEVANVVLFLCS
Template Known Secondary structure  GGGT
SB

GGGGGS
TT
T........TSS
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   159160.........170.........180.........190.........200.........210. ........220.........230
 
   241........250.......
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Query Sequence  . TTGKVGETYNIGGHNER
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Template Sequence  ELASYITGEVIHVNGGMF
Template Known Secondary structure  GGGTT

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   231........240........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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