Return to main results Retrieve Phyre Job Id

Job DescriptionP27830
Confidence96.85%DateThu Jan 5 11:44:08 GMT 2012
Rank331Aligned Residues61
% Identity18%Templatec2g1uA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:hypothetical protein tm1088a; PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........
Predicted Secondary structure 
























Query SS confidence 



































































Query Sequence  RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARV
Query Conservation 
 










  

  

  
  
    
                      
  

 
       
Alig confidence 







.



























......
























Template Conservation    


 
 .
  
  

  
   
  



       ......              
      
   
Template Sequence  KYIVIFGC. GRLGSLIANLASSSGHSVVVVDKNEYAF. . . . . . HRLNSEFSGFTVVGDAAEFETLKEC
Template Known Secondary structure 


.STT
S
GGGG......GGS
TT

SS
TTSTT
Template Predicted Secondary structure 


.






......






Template SS confidence 



































































   8.10..... ....20.........30.........40... ......50.........60........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions