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Job DescriptionP27830
Confidence98.55%DateThu Jan 5 11:44:08 GMT 2012
Rank269Aligned Residues205
% Identity15%Templatec2ehdB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:oxidoreductase, short-chain dehydrogenase/reductase family; PDBTitle: crystal structure analysis of oxidoreductase
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MR. KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVM
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Template Sequence  MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV
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S
STTSTT
S
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
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Query Sequence  HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSP
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Template Sequence  NNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGA. . . . . . . . . . . . . . A
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GGGS
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   84.....90.........100.........110.........120.........130.........140........ .
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  YSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCV
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Template Sequence  YNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVKLK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PEDVAQAVLFA
Template Known Secondary structure  GGGT





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   150.........160.........170.........180...... ...190.......
 
   240.........250.
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Query Sequence  ATTGKVGETYNI
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Template Sequence  LEMPGHAMVSEI
Template Known Secondary structure  S

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S
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   211........220..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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