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Job Description | P27830 | Confidence | 95.66% | Date | Thu Jan 5 11:44:08 GMT 2012 |
Rank | 404 | Aligned Residues | 118 |
% Identity | 16% | Template | c2dfdD_ |
PDB info |
PDB header:oxidoreductase | Chain: D: PDB Molecule:malate dehydrogenase; |
PDBTitle: crystal structure of human malate dehydrogenase type 2
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Resolution | 1.90 Å |
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3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
K | I | L | I | T | G | G | A | G | F | I | G | S | A | L | V | R | Y | I | I | N | E | T | . |
S | D | A | V | V | V | V | D | K | L | T | Y | A | G | N | L | M | S | L | A | P | V | A | Q | S | E | R | F | A | F | E | K | V | D | I | C | D | R | A | E | L | A | R | V | F | T | E | H | Q | P | D | C | V | M | H | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | V | A | V | L | G | A | S | G | G | I | G | Q | P | L | S | L | L | L | K | N | S | P | L | V | S | R | L | T | L | Y | D | I | A | H | T | P | G | V | A | A | D | L | S | H | I | E | T | K | A | A | V | K | G | Y | L | G | . |
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P | E | Q | L | P | D | C | L | K | G | . |
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C | D | V | V | V | I | P |
Template Known Secondary structure |   |
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| T | T |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  | T | T | S | S | S | S |
|  |  |  |  |  |  | S | . | . | . | . | G | G | G |  |  |  |  |  | T | T | . | . |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
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82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | A | E | S | H | V | D | R | S | I | D | G | P | A | A | F | I | E | T | N | I | V | G | T | Y | T | L | L | E | A | A | R | A | Y | W | N | A | L | T | E | D | K | K | S | A | F | R |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | G | V | P | R | K | P | G | . |
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M | T | R | D | D | L | F | N | T | N | A | T | I | V | A | T | L | T | A | A | C | A | Q | H | C | P | E | A | M | I | C | V | I | A | N | P | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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82 | . | . | . | . | . | . | . | |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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