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Job DescriptionP27830
Confidence95.66%DateThu Jan 5 11:44:08 GMT 2012
Rank404Aligned Residues118
% Identity16%Templatec2dfdD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of human malate dehydrogenase type 2
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20..... ....30.........40.........50.........60.........70.........80.
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Query Sequence  KILITGGAGFIGSALVRYIINET. SDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL
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Template Sequence  KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAAVKGYLG. . . . PEQLPDCLKG. . CDVVVIP
Template Known Secondary structure  TTTSTT
TTSSSTTSSSS
S....GGGTT..
S
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   8.10.........20.........30.........40.........50.........60.... .....70.... .....80.
 
   82.......90.........100.........110.........120........
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Query Sequence  AAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFR
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Template Sequence  AGVPRKPG. . MTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPV
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GGGG
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   82....... 90.........100.........110.........120......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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