Return to main results Retrieve Phyre Job Id

Job DescriptionP27830
Confidence100.00%DateThu Jan 5 11:44:08 GMT 2012
Rank25Aligned Residues308
% Identity27%Templatec2c20D_
PDB info PDB header:isomeraseChain: D: PDB Molecule:udp-glucose 4-epimerase; PDBTitle: crystal structure of udp-glucose 4-epimerase
Resolution2.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLA
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Template Sequence  SILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTG. . . . . . . HEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFA
Template Known Secondary structure  TTTSTT



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   3......10.........20.........30....... ..40.........50.........60.........70.....
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  AESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSA
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Template Sequence  ADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFI. . . . . . . . . . . FSSTAATYGEVDVDLITEETMTNPTNTYGE
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   76...80.........90.........100.........110.... .....120.........130.........140....
 
   163......170.........180.........190........ .200.........210.........220 ......
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Query Sequence  SKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE. . . . . . . . . KLIPLMILNALAGKSLPVYGNG. . . . . . . QQIRDW
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Template Sequence  TKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDY
Template Known Secondary structure  TSS

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   145....150.........160.........170.........180.........190.........200.........210.........220....
 
   227..230.........240.... .....250.........260.........270.........280.........290.........300...
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Query Sequence  LYVEDHARALYCVATTGK. . . VGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYAI
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Template Sequence  IHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEI. . . . . . . . . . . . PAEVAPRRAGDPARLVA
Template Known Secondary structure  TT





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   225....230.........240.........250.........260.........270..... ....280.........290..
 
   304.....310....... ..320.........330.........340
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Query Sequence  DASKIARELGWLPQ. ETFESGMRKTVQWYLANESWWKQ
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Template Sequence  SSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQPNGYEK
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   293......300.........310.........320.........330
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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