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Job DescriptionP27830
Confidence98.78%DateThu Jan 5 11:44:08 GMT 2012
Rank199Aligned Residues250
% Identity10%Templatec1w4zA_
PDB info PDB header:antibiotic biosynthesisChain: A: PDB Molecule:ketoacyl reductase; PDBTitle: structure of actinorhodin polyketide (actiii) reductase
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL
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Template Sequence  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV. EADGRTCDVRSVPEIEALVAAVVERYGPVD
Template Known Secondary structure 
S
SSTT
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  AAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYS
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Template Sequence  VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG. . . . . . . VVHAAPYS
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GGG

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   86...90.........100.........110.........120.........130.........140.........150 ........
 
   162.......170.........180.........190.........200.........210....... ..220.........230........
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Query Sequence  ASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVY. . . GNGQQIRDWLYVEDHARALYC
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Template Sequence  ASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAY
Template Known Secondary structure  GGGT
SB
STT

TTSTTSS
B
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   159160.........170.........180.........190.........200.........210.........220.........230........
 
   239240 .........250.........
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Query Sequence  VA. . TTGKVGETYNIGGHNERKN
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Template Sequence  LIGPGAAAVTAQALNVCGGLGNY
Template Known Secondary structure  TSGGGTT

S
STT



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   239240.........250.........260.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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