Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9R4
Confidence94.51%DateThu Jan 5 11:11:04 GMT 2012
Rank59Aligned Residues52
% Identity23%Templatec1nekB_
PDB info PDB header:oxidoreductase/electron transportChain: B: PDB Molecule:succinate dehydrogenase iron-sulfur protein; PDBTitle: complex ii (succinate dehydrogenase) from e. coli with2 ubiquinone bound
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1. .......10...... ...20.... .....30.........40.. .......50.....
Predicted Secondary structure 

.







........


..








....







Query SS confidence 

.













. . . . . . . .







. .

















. . . .












Query Sequence  MP. KIVILPHQDLCPDG. . . . . . . . AVLEANSG. . ETILDAALRNGIEIEHAC. . . . EKSCACTTCHCIV
Query Conservation 

.

 
       
 
........ 

    
.. 


 
    

 
   
.... 
 
 



 
 
Alig confidence 

.




...





........







..

















....












Template Conservation 
     
 ...
               
        





  
    
 
 
   

 
 

 
 
 
Template Sequence  MRLEFSIY. . . RYNPDVDDAPRMQDYTLEADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNM
Template Known Secondary structure 


...

TTT
SS




SSS

B
TT





SSSS
S
TT
Template Predicted Secondary structure 
...































Template SS confidence 





































































   1....... .10.........20.........30.........40.........50.........60.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions