Job Description P32672 Confidence 2.75% Date Thu Jan 5 11:50:00 GMT 2012 Rank 44 Aligned Residues 82 % Identity 21% Template c3rkoK_ PDB info PDB header:oxidoreductase Chain: K: PDB Molecule:nadh-quinone oxidoreductase subunit k; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	P	F	A	A	A	D	P	L	R	V	I	P	S	I	M	V	G	S	V	C	G	A	V	T	A	A	L	V	G	A	Q	C	Y	A	G	W	G	G	L	I	V	L	P	V	V	E	G	K	L	G	Y	I	A	A	V	A	V	G	A	V	V	T	A	V	C	V	N	V	L	K	S	L	A	R	K	N	G	S
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.
Template Sequence		G	L	T	G	L	V	I	R	R	N	L	L	F	M	L	I	G	L	E	I	M	I	N	A	S	A	L	A	F	V	V	A	G	S	Y	W	G	.	.	.	.	.	.	.	.	Q	T	D	G	Q	V	M	Y	I	L	A	I	S	L	A	A	A	E	A	S	I	G	L	A	L	L	L	Q	L	H	R	R	R	Q	N
Template Known Secondary structure											B																										T	T	.	.	.	.	.	.	.	.		S																											T	T	T	T		S	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.									.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		344	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	D	E	K	E	D	D	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	I	D	S	V	S	E	M	R
Template Known Secondary structure			B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions