Job Description P32672 Confidence 18.20% Date Thu Jan 5 11:50:00 GMT 2012 Rank 9 Aligned Residues 193 % Identity 15% Template c3d9sB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:aquaporin-5; PDBTitle: human aquaporin 5 (aqp5) - high resolution x-ray structure Resolution 2.00 Å

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		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.								.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.
Query Sequence		I	I	P	I	V	G	T	L	I	T	A	G	I	M	M	W	G	L	G	E	P	V	.	.	.	.	.	.	.	G	A	L	T	N	S	L	T	Q	W	L	Q	G	M	Q	Q	G	S	I	V	M	L	A	V	I	M	G	L	M	L	A	F	D	M	G	G	P	V	N	K	V	A	Y	A	F	M	L	I	C	V	A
Query Conservation																								.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.														.
Template Conservation																																												.
Template Sequence		L	Q	I	A	L	A	F	G	L	A	I	G	T	L	A	Q	A	L	G	P	V	S	G	G	H	I	N	P	A	I	T	L	A	L	L	V	G	N	Q	I	S	L	.	L	R	A	F	F	Y	V	A	A	Q	L	V	G	A	I	A	G	A	G	I	L	Y	G	V	A	P	L	N	A	R	G	N	L	A	V	N	A
Template Known Secondary structure																																						T	T		S			.																									S						T	T	T	T
Template Predicted Secondary structure																																												.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		Q	G	V	Y	T	V	V	A	I	A	A	V	G	I	C	I	P	P	L	G	M	G	L	A	T	L	I	G	R	K	N	F	S	A	E	E	R	.	.	E	T	G	K	A	A	L	V	M	G	C	V	G	V	T	E	G	A	I	P	F	A	A	A	D	P	L	R	V	I	P	S	I	M	V	G	S	V	C	G	A
Query Conservation																																							.	.
Alig confidence																																							.	.																																									.
Template Conservation																																																																																	.
Template Sequence		L	N	N	N	T	T	Q	G	Q	A	M	V	V	E	L	I	L	T	F	Q	L	A	L	C	I	F	A	S	T	D	S	R	R	T	S	P	V	G	S	P	A	L	S	I	G	L	S	V	T	L	G	H	L	V	G	I	Y	F	T	G	C	S	M	N	P	A	R	S	F	G	P	A	V	V	M	N	R	F	S	.
Template Known Secondary structure				T	T	S																								T		S	S			S																									S			S	S											T	T				.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	A	L	V	G	A	Q	C	Y	A	G	W	G	G	L	I	V	L	P	V	V	E	G	K	L	G	Y	I	A	A	V	A	V	G	A	V	V	T	A	V	C	V	N	V	L	K	S	L	A	R	K	N	G	S	S	T	D	E	K	E	D	D	L	D	L	D	F	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	H	W	V	F	W	V	G	P	I	V	G	A	V	L	A	A	I	L	Y	F	Y	.	.	.	L	L	F	P	N	S	L	S	L	S	E	R	V	A	I	I	K	G	T	Y	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T																			T	.	.	.	T	T	S															T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template SS confidence
																									201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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